Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 RPL37P10-201ENST00000412884 288 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 AC074085.1-201ENST00000413598 418 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 RSU1P2-202ENST00000437884 485 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 HMGB3P11-201ENST00000440127 604 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 SNRPCP2-201ENST00000504370 475 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 AC010350.1-201ENST00000504908 231 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 RNU2-53P-201ENST00000516257 147 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 SUMO2P20-201ENST00000520803 283 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 AC099489.2-201ENST00000574976 260 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 AC004805.2-201ENST00000605382 482 ntBASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.26□□□□□ -1.41
NEDD1Q8NHV4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 RPL23P2-201ENST00000320371 421 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 RNU6-874P-201ENST00000362390 105 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 SNORD113-1-201ENST00000365321 69 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 RNU6-996P-201ENST00000365438 107 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 RNU6-108P-201ENST00000365558 107 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 RNU6-1040P-201ENST00000383974 107 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 RNU6-746P-201ENST00000384112 109 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 HSPA8P15-201ENST00000401676 786 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 RNU4-26P-201ENST00000410270 107 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC139712.2-201ENST00000424302 339 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 MTCO3P45-201ENST00000443036 613 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AL161722.1-201ENST00000446972 1032 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC104651.2-201ENST00000447549 528 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 PCMTD1P1-201ENST00000455560 355 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 BX284632.1-201ENST00000478218 541 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC022616.6-201ENST00000520479 119 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC024224.1-201ENST00000538284 609 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AP002373.2-201ENST00000541631 1060 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AL670379.11-201ENST00000604059 253 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AL670379.10-201ENST00000604330 253 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AL670379.12-201ENST00000605291 253 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AL670379.9-201ENST00000605428 253 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC211433.2-201ENST00000608433 387 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AL034549.2-201ENST00000618285 3373 ntBASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NEDD1Q8NHV4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AC003973.3-201ENST00000624863 2822 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 Y_RNA.46-201ENST00000362695 102 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 Y_RNA.373-201ENST00000365600 103 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 RNU6-606P-201ENST00000384721 111 ntBASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NEDD1Q8NHV4 RNU4-6P-201ENST00000410804 122 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms