Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS8Q8N3P4 AC092111.2-201ENST00000611627 1414 ntBASIC3.99□□□□□ -1.77
VPS8Q8N3P4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS8Q8N3P4 MIR27B-201ENST00000385129 97 ntBASIC3.99□□□□□ -1.77
VPS8Q8N3P4 AC069218.2-201ENST00000411665 344 ntBASIC3.99□□□□□ -1.77
VPS8Q8N3P4 AL513328.1-201ENST00000446460 224 ntBASIC3.99□□□□□ -1.77
VPS8Q8N3P4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS8Q8N3P4 AC114781.4-201ENST00000513707 639 ntBASIC3.99□□□□□ -1.77
VPS8Q8N3P4 AC103783.1-201ENST00000520506 373 ntBASIC3.99□□□□□ -1.77
VPS8Q8N3P4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS8Q8N3P4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS8Q8N3P4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS8Q8N3P4 AL845331.3-202ENST00000562856 261 ntBASIC3.99□□□□□ -1.77
VPS8Q8N3P4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS8Q8N3P4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS8Q8N3P4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS8Q8N3P4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS8Q8N3P4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS8Q8N3P4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS8Q8N3P4 AC007563.3-201ENST00000433233 371 ntBASIC3.98□□□□□ -1.77
VPS8Q8N3P4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS8Q8N3P4 COX6CP2-201ENST00000444980 225 ntBASIC3.98□□□□□ -1.77
VPS8Q8N3P4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS8Q8N3P4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS8Q8N3P4 AC133134.1-201ENST00000466800 359 ntBASIC3.98□□□□□ -1.77
VPS8Q8N3P4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS8Q8N3P4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS8Q8N3P4 AC103810.6-201ENST00000606708 136 ntBASIC3.98□□□□□ -1.77
VPS8Q8N3P4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 RNA5SP210-201ENST00000391034 120 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 PTP4A1P1-201ENST00000420539 515 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 RPL36AP51-201ENST00000487216 318 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 RN7SKP24-201ENST00000515888 284 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 RNU6-964P-201ENST00000516524 69 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 AC009097.3-201ENST00000563557 1018 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 AC106734.1-201ENST00000568646 663 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 AC007621.1-201ENST00000604544 437 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 AC004944.1-201ENST00000517807 3059 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.97□□□□□ -1.77
VPS8Q8N3P4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS8Q8N3P4 MAPK10-362ENST00000641864 4484 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.96□□□□□ -1.77
VPS8Q8N3P4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
VPS8Q8N3P4 SNORD21-201ENST00000383953 95 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 NCSTNP1-201ENST00000406229 144 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AL513175.2-201ENST00000422071 443 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AC008280.2-201ENST00000455473 307 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 EIF2S2P4-201ENST00000461070 984 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AC093331.1-201ENST00000521474 169 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AL391156.1-201ENST00000554965 554 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AC084035.1-201ENST00000634543 607 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 MIR6733-201ENST00000635723 61 ntBASIC3.96□□□□□ -1.77
VPS8Q8N3P4 AL445437.1-201ENST00000623157 3087 ntBASIC3.96□□□□□ -1.78
VPS8Q8N3P4 AC093311.1-201ENST00000506586 2021 ntBASIC3.96□□□□□ -1.78
VPS8Q8N3P4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
VPS8Q8N3P4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VPS8Q8N3P4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS8Q8N3P4 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 HSPE1P6-201ENST00000479457 291 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 MIR5092-201ENST00000583139 88 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 AC079089.3-201ENST00000603094 673 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 RPL23AP92-201ENST00000603609 255 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 AC116312.1-201ENST00000606841 314 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 AC004825.2-201ENST00000616634 455 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 USP9YP20-201ENST00000419224 558 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 AL390023.1-201ENST00000428836 262 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.95□□□□□ -1.78
VPS8Q8N3P4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS8Q8N3P4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS8Q8N3P4 PNPT1P2-201ENST00000456768 2050 ntBASIC3.94□□□□□ -1.78
VPS8Q8N3P4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VPS8Q8N3P4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS8Q8N3P4 BTF3P9-201ENST00000418784 283 ntBASIC3.94□□□□□ -1.78
VPS8Q8N3P4 AC093151.1-201ENST00000427711 313 ntBASIC3.94□□□□□ -1.78
VPS8Q8N3P4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms