Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AL592293.2-201ENST00000422292 996 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 MTCO2P19-201ENST00000427513 598 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 NANOGNBP1-201ENST00000448444 480 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC111193.1-201ENST00000504097 155 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC017037.1-201ENST00000508460 471 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 OR51K1P-201ENST00000510214 950 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC025881.1-201ENST00000518851 512 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 IGKV2D-10-201ENST00000520194 281 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 HIGD1AP5-201ENST00000529959 259 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 POLR2KP1-201ENST00000553226 168 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 MTCO3P24-201ENST00000572729 782 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 MIR4528-201ENST00000577763 90 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC012603.1-201ENST00000606424 528 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC090517.2-201ENST00000614966 680 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC145207.9-201ENST00000623802 325 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC011944.2-201ENST00000624440 683 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AL008636.1-201ENST00000625038 1018 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AC005609.4-201ENST00000625071 447 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 AL079343.1-201ENST00000572358 1771 ntBASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
ZNF549Q6P9A3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 MAPK10-253ENST00000641010 4072 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 CR383658.2-201ENST00000547576 1525 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 OR10J6P-201ENST00000289731 930 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 Y_RNA.390-201ENST00000383932 102 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC007066.1-201ENST00000392902 381 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RPS24P12-201ENST00000402084 394 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC011933.1-201ENST00000413334 321 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC004552.1-201ENST00000419089 348 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 OR8F1P-201ENST00000425243 930 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 IPMKP1-201ENST00000425988 855 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 MTND1P2-201ENST00000430604 821 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RPL21P110-201ENST00000433345 446 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 ELOCP18-201ENST00000434209 337 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 UBE2V1P8-201ENST00000437166 265 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AL121601.2-201ENST00000438019 707 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AL450263.2-201ENST00000439400 589 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC092809.1-201ENST00000441469 474 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 VN1R10P-201ENST00000447106 875 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RPL23AP35-201ENST00000451906 501 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 ARPC3P2-201ENST00000457786 533 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RPL7AP52-201ENST00000458096 790 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 OR9M1P-201ENST00000459641 921 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC116533.1-201ENST00000459748 321 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RPS26P3-201ENST00000470205 348 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC004924.1-201ENST00000480160 781 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC090543.2-201ENST00000483963 348 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AC004057.1-201ENST00000485827 348 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 AF213884.1-201ENST00000488102 463 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 SNX5P1-201ENST00000505757 1041 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 KCTD9P2-201ENST00000512203 1013 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RNY4P37-201ENST00000516225 96 ntBASIC4.13□□□□□ -1.75
ZNF549Q6P9A3 RNA5SP135-201ENST00000517019 125 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms