Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 AC090616.5-202ENST00000582111 297 ntBASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 AL139022.2-201ENST00000606934 443 ntBASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 AC026634.1-201ENST00000634369 198 ntBASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 AL445984.1-201ENST00000637834 659 ntBASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 PWAR6-201ENST00000552334 4618 ntBASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 CR381670.1-201ENST00000624291 1693 ntBASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.54□□□□□ -1.84
HIST2H2AA3Q6FI13 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 RNU6-657P-201ENST00000383904 107 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 RNU6-339P-201ENST00000384310 107 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AL133384.1-201ENST00000412744 351 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 RPL30P2-201ENST00000414021 291 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 RPL7P53-201ENST00000421245 739 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AL513174.1-201ENST00000423182 629 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 SDCBPP2-201ENST00000424643 885 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 OSTCP5-201ENST00000425293 453 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 DPRXP1-201ENST00000426312 460 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 HMGB3P5-201ENST00000428894 612 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 TRBV26-201ENST00000456572 344 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 UBDP1-202ENST00000457888 382 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 BOLA3P3-201ENST00000505182 232 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC021146.1-201ENST00000511202 716 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 FTH1P9-201ENST00000513251 355 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 RN7SKP21-201ENST00000516503 220 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 MIR3160-1-201ENST00000577972 85 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AL049634.3-201ENST00000604968 457 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AL391834.2-201ENST00000609982 546 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC024941.1-201ENST00000612250 334 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AC123767.1-202ENST00000620407 817 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 AL732618.1-201ENST00000623251 301 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 Z99496.1-201ENST00000469424 1477 ntBASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIST2H2AA3Q6FI13 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
HIST2H2AA3Q6FI13 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.53□□□□□ -1.85
HIST2H2AA3Q6FI13 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
HIST2H2AA3Q6FI13 AL157700.1-201ENST00000561973 1432 ntBASIC3.53□□□□□ -1.85
HIST2H2AA3Q6FI13 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 RNU5E-10P-201ENST00000363506 118 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 MTND4LP20-201ENST00000402379 270 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 AL590704.1-201ENST00000402856 794 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 AL391417.1-201ENST00000404100 426 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 RSL24D1P1-201ENST00000404972 493 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 MTHFD2P2-201ENST00000407725 247 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 RNA5SP56-201ENST00000410277 118 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 OR4K6P-201ENST00000416478 897 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 MOB1AP1-201ENST00000430903 535 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 HSFY7P-201ENST00000432672 318 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 HSFY8P-201ENST00000437934 318 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 SDR42E1P3-201ENST00000438345 502 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 AL138799.3-201ENST00000438968 350 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 AC127537.2-201ENST00000439258 465 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 HSFY5P-201ENST00000453726 309 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 ANP32BP2-201ENST00000454525 545 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 TVP23BP2-201ENST00000455082 615 ntBASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.52□□□□□ -1.85
HIST2H2AA3Q6FI13 PABPC1P3-201ENST00000469174 459 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms