Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC068831.8-201ENST00000620171 435 ntBASIC2.9□□□□□ -1.95
LPCAT4Q643R3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.9□□□□□ -1.95
LPCAT4Q643R3 AC068724.3-201ENST00000625906 87 ntBASIC2.9□□□□□ -1.95
LPCAT4Q643R3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.9□□□□□ -1.95
LPCAT4Q643R3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
LPCAT4Q643R3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 RNU6-1181P-201ENST00000384191 106 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 SNORA57.1-201ENST00000391227 145 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AL031121.1-201ENST00000406553 254 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 RPL5P18-201ENST00000406671 891 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 MIR1193-201ENST00000408109 78 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AL606490.8-201ENST00000441624 319 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC140076.1-201ENST00000449897 361 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 HMGB1P25-201ENST00000468402 607 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 ACTR3P3-201ENST00000480448 893 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC126121.1-201ENST00000482313 553 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 DYNLL1P6-201ENST00000503440 264 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 MTND4LP31-201ENST00000514859 294 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AL157394.1-201ENST00000562983 1224 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC034268.2-201ENST00000571784 482 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 MIR3160-1-201ENST00000577972 85 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 MIR2682-201ENST00000580305 110 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC078899.3-201ENST00000599065 212 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 IGHV3-29-201ENST00000604817 344 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 OR2BH1P-201ENST00000608850 864 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 AC110792.4-201ENST00000609843 298 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
LPCAT4Q643R3 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.89□□□□□ -1.95
LPCAT4Q643R3 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 SNORA26.7-201ENST00000391288 122 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AL357075.1-201ENST00000404107 726 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 PRRC2CP1-201ENST00000404428 159 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 RPS7P2-201ENST00000435134 607 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC108734.1-201ENST00000439549 399 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 ELOCP23-201ENST00000452014 332 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC010285.1-201ENST00000470580 392 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC091959.2-201ENST00000477363 321 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 RN7SKP282-201ENST00000516824 299 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC093227.2-201ENST00000589357 285 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 CCDC58P3-201ENST00000590792 430 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 VN1R85P-201ENST00000601587 426 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AC100793.4-201ENST00000613683 429 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 AL590240.3-201ENST00000621416 943 ntBASIC2.88□□□□□ -1.95
LPCAT4Q643R3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LPCAT4Q643R3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 ZNF285B-201ENST00000561698 1767 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 RPL9P7-201ENST00000330965 580 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 RNA5SP124-201ENST00000362739 110 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 AL591034.1-201ENST00000407447 340 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 MIR1250-201ENST00000408098 113 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 YPEL5P1-201ENST00000419731 367 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 AC073063.1-201ENST00000434352 607 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 NPM1P13-201ENST00000452663 865 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 RPS24P6-201ENST00000452670 400 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 RPS17P11-201ENST00000474297 293 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 AC025459.1-201ENST00000504072 156 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 AC021678.1-201ENST00000505195 936 ntBASIC2.87□□□□□ -1.95
LPCAT4Q643R3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
LPCAT4Q643R3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms