Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC010469.1-201ENST00000463864 576 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC108751.2-201ENST00000469993 231 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC011825.1-201ENST00000484967 388 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 DEFB109F-201ENST00000491870 277 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 RN7SL810P-201ENST00000493031 276 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC104986.1-201ENST00000517978 436 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 MTND4LP26-201ENST00000518144 282 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 MYL12AP1-201ENST00000518490 515 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AL139174.1-201ENST00000531489 886 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 LSM6P2-201ENST00000552208 177 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 IPO5P1-202ENST00000600039 287 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC108747.1-201ENST00000609508 535 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC025588.4-201ENST00000615802 908 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC068722.2-201ENST00000618734 544 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 AC008785.1-201ENST00000624475 456 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 OR4G11P-202ENST00000642116 1414 ntBASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SLC44A4Q53GD3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 MAPK10-303ENST00000641324 3959 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC021146.4-201ENST00000309229 279 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 Y_RNA.359-201ENST00000365498 102 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 SNORA51.6-201ENST00000384151 125 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 RPS26P8-201ENST00000393490 348 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 DEFB108C-201ENST00000400154 252 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 DHFRP6-201ENST00000401776 268 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 VN1R8P-201ENST00000407739 893 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 PGBD4P8-201ENST00000412993 562 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 OR4F13P-201ENST00000428478 931 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 RPS20P1-201ENST00000434853 354 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 MTND5P28-201ENST00000438005 1594 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 PTMAP3-201ENST00000447474 330 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC114755.5-201ENST00000447760 831 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 RNU6-956P-201ENST00000458868 103 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC004069.2-201ENST00000505438 1114 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC079140.3-201ENST00000511111 550 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC016065.2-201ENST00000514530 444 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AP000827.1-201ENST00000527814 258 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 OR6C7P-201ENST00000547875 934 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC025884.1-201ENST00000556034 378 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC124068.1-201ENST00000563131 678 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC034105.4-201ENST00000568304 277 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 MIR4637-201ENST00000582405 84 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 BNIP3P30-201ENST00000601184 574 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AL136363.2-201ENST00000604173 851 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC128687.1-201ENST00000605304 619 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC090948.2-201ENST00000607363 564 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC009509.4-201ENST00000619202 509 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AL023881.1-201ENST00000621088 301 ntBASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms