Protein–RNA interactions for Protein: Q16586

SGCA, Alpha-sarcoglycan, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCAQ16586 AC084357.1-201ENST00000473404 255 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SGCAQ16586 AC005726.1-201ENST00000494679 427 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 RN7SKP244-201ENST00000516513 307 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 RNU6-579P-201ENST00000516879 102 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.14□□□□□ -1.91
SGCAQ16586 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.14□□□□□ -1.91
SGCAQ16586 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.14□□□□□ -1.91
SGCAQ16586 AF279873.1-201ENST00000523393 313 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 AP000926.4-201ENST00000527351 454 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.14□□□□□ -1.91
SGCAQ16586 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.14□□□□□ -1.91
SGCAQ16586 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.14□□□□□ -1.91
SGCAQ16586 AC074029.1-201ENST00000552531 1044 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 AC008687.2-201ENST00000597865 520 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.14□□□□□ -1.91
SGCAQ16586 BNIP3P38-201ENST00000601117 544 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 MTATP6P2-201ENST00000603319 678 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 U4.6-201ENST00000621618 127 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 AP003355.3-201ENST00000623465 114 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 AL109659.3-201ENST00000624985 950 ntBASIC3.14□□□□□ -1.91
SGCAQ16586 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SGCAQ16586 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.14□□□□□ -1.91
SGCAQ16586 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SGCAQ16586 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SGCAQ16586 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SGCAQ16586 SNORA63.3-201ENST00000362682 132 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SGCAQ16586 RPL21P17-201ENST00000397467 475 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AC025750.1-201ENST00000399891 379 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 DNAJC19P6-201ENST00000401853 280 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AL136116.1-201ENST00000403591 381 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AL445189.1-201ENST00000405722 338 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 RNU6ATAC-201ENST00000408749 126 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 RNU6-272P-201ENST00000411028 104 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCAQ16586 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AC246680.2-201ENST00000422106 389 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 SDCBPP2-201ENST00000424643 885 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCAQ16586 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCAQ16586 AL158071.1-201ENST00000430315 461 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AL035246.1-201ENST00000433554 1255 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCAQ16586 YWHAZP8-201ENST00000436935 731 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SGCAQ16586 AC009969.1-201ENST00000438726 172 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCAQ16586 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCAQ16586 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCAQ16586 MTCO3P35-201ENST00000485582 781 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 RPS27P23-201ENST00000487608 251 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AC093663.1-201ENST00000497190 394 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 TXNP6-201ENST00000510190 310 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 MTCO2P32-201ENST00000514865 403 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 RN7SKP18-201ENST00000516005 275 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 SNORD59.2-201ENST00000516873 68 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 RNU1-45P-201ENST00000517191 141 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 RANP9-201ENST00000519957 271 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 MTND1P36-201ENST00000522384 936 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 HMGB1P1-201ENST00000522557 636 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 IGJP1-201ENST00000522682 475 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 MTND2P26-201ENST00000528255 1029 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AC092451.2-201ENST00000538746 658 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCAQ16586 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCAQ16586 TGIF1P1-201ENST00000558095 802 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.13□□□□□ -1.91
SGCAQ16586 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCAQ16586 MIR4789-201ENST00000577469 82 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AC006116.10-201ENST00000591836 581 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AC078899.3-201ENST00000599065 212 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCAQ16586 AL109653.1-201ENST00000603091 248 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCAQ16586 AL390240.1-201ENST00000612950 384 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 AL121772.2-201ENST00000614331 297 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.13□□□□□ -1.91
SGCAQ16586 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCAQ16586 AL356118.1-201ENST00000635272 1078 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.13□□□□□ -1.91
SGCAQ16586 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCAQ16586 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.13□□□□□ -1.91
SGCAQ16586 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCAQ16586 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCAQ16586 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SGCAQ16586 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.13□□□□□ -1.91
SGCAQ16586 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SGCAQ16586 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 FRG1CP-201ENST00000358464 769 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SGCAQ16586 MIR554-201ENST00000384874 96 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SGCAQ16586 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SGCAQ16586 RPL5P18-201ENST00000406671 891 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms