Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC111000.3-201ENST00000508057 576 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC093809.1-201ENST00000509155 340 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC010625.1-201ENST00000511296 403 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 OR4R3P-201ENST00000525084 838 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.54□□□□□ -1.84
CX3CL1P78423 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 MIR3915-201ENST00000578518 97 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 WISP1-OT1-201ENST00000602893 642 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC090181.2-201ENST00000602975 672 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC026368.1-201ENST00000614934 690 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC048344.4-201ENST00000619744 527 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 MIR7703-201ENST00000620784 77 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC007494.3-201ENST00000624660 743 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC091925.2-201ENST00000625059 256 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CL1P78423 RAD17P1-201ENST00000418130 2042 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CL1P78423 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
CX3CL1P78423 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CL1P78423 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CL1P78423 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CL1P78423 RNA5SP513-201ENST00000364648 118 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CL1P78423 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CL1P78423 MIR585-201ENST00000384887 94 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 MIR937-201ENST00000401271 86 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AL031577.2-201ENST00000404133 280 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 RNU6-920P-201ENST00000410926 92 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 RN7SKP167-201ENST00000411047 285 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 SNRPFP1-201ENST00000414761 252 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CL1P78423 MTCO2P5-201ENST00000422621 426 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AC006548.1-201ENST00000427470 102 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AL390023.1-201ENST00000428836 262 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 ELOCP8-201ENST00000439309 332 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 ELOCP15-201ENST00000442090 332 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 RPL30P9-201ENST00000465586 330 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 SETP11-201ENST00000473027 690 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 HMGB1P36-201ENST00000487709 576 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AC023424.2-201ENST00000493479 777 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CL1P78423 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 PARP4P3-201ENST00000510265 317 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AC024589.1-201ENST00000512207 263 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CL1P78423 MTCO1P49-201ENST00000523429 802 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 OR5M7P-201ENST00000526140 972 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AL356057.1-201ENST00000533798 831 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 EEF1B2P4-201ENST00000551398 348 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CL1P78423 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CL1P78423 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CX3CL1P78423 ELOCP28-201ENST00000590044 317 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC090186.1-201ENST00000605991 572 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AL138721.1-201ENST00000616756 179 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AL356266.1-201ENST00000623311 483 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CL1P78423 CR381572.1-201ENST00000625098 102 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 FP325313.1-201ENST00000638228 703 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CL1P78423 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CX3CL1P78423 OR56B2P-202ENST00000641377 2453 ntBASIC3.53□□□□□ -1.84
CX3CL1P78423 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CX3CL1P78423 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CX3CL1P78423 AC097504.1-201ENST00000515103 2415 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms