Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 Y_RNA.598-201ENST00000410480 95 ntBASIC4.24□□□□□ -1.73
RAE1P78406 RN7SKP247-201ENST00000411094 308 ntBASIC4.24□□□□□ -1.73
RAE1P78406 EIF4A1P3-201ENST00000411521 244 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.24□□□□□ -1.73
RAE1P78406 MTCO2P5-201ENST00000422621 426 ntBASIC4.24□□□□□ -1.73
RAE1P78406 USP9YP9-201ENST00000429406 715 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC091862.1-201ENST00000438016 1100 ntBASIC4.24□□□□□ -1.73
RAE1P78406 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 AL022238.1-201ENST00000442557 355 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.24□□□□□ -1.73
RAE1P78406 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 KLF3P2-201ENST00000465138 268 ntBASIC4.24□□□□□ -1.73
RAE1P78406 PABPC1P3-201ENST00000469174 459 ntBASIC4.24□□□□□ -1.73
RAE1P78406 LARP1BP2-201ENST00000486594 519 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC107401.1-201ENST00000503426 685 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AF131216.2-201ENST00000512316 564 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC034159.1-201ENST00000513885 583 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.24□□□□□ -1.73
RAE1P78406 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 AC092470.1-201ENST00000546187 132 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.24□□□□□ -1.73
RAE1P78406 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.24□□□□□ -1.73
RAE1P78406 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.24□□□□□ -1.73
RAE1P78406 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.24□□□□□ -1.73
RAE1P78406 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.24□□□□□ -1.73
RAE1P78406 MIR4270-201ENST00000581799 70 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC022916.3-201ENST00000592961 742 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC112191.3-201ENST00000604371 277 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC024940.4-201ENST00000605507 246 ntBASIC4.24□□□□□ -1.73
RAE1P78406 Z98200.1-201ENST00000607298 470 ntBASIC4.24□□□□□ -1.73
RAE1P78406 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 AC104010.1-201ENST00000616889 150 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC108479.2-201ENST00000617314 601 ntBASIC4.24□□□□□ -1.73
RAE1P78406 AC006065.6-201ENST00000625201 545 ntBASIC4.24□□□□□ -1.73
RAE1P78406 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
RAE1P78406 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RAE1P78406 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RAE1P78406 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RAE1P78406 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RAE1P78406 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.23□□□□□ -1.73
RAE1P78406 NOL8P1-201ENST00000508336 3529 ntBASIC4.23□□□□□ -1.73
RAE1P78406 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RAE1P78406 RNY4P24-201ENST00000362735 96 ntBASIC4.23□□□□□ -1.73
RAE1P78406 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.23□□□□□ -1.73
RAE1P78406 RNU6-533P-201ENST00000384144 107 ntBASIC4.23□□□□□ -1.73
RAE1P78406 RNU6-809P-201ENST00000384461 107 ntBASIC4.23□□□□□ -1.73
RAE1P78406 RNU6-297P-201ENST00000384636 107 ntBASIC4.23□□□□□ -1.73
RAE1P78406 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RAE1P78406 SNORA40.3-201ENST00000390964 122 ntBASIC4.23□□□□□ -1.73
RAE1P78406 ENSAP1-201ENST00000392855 326 ntBASIC4.23□□□□□ -1.73
RAE1P78406 USP9YP13-201ENST00000417797 480 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AIMP1P1-201ENST00000418670 937 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AL139095.3-201ENST00000419672 1203 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AL358176.3-201ENST00000420757 454 ntBASIC4.23□□□□□ -1.73
RAE1P78406 PDSS1P1-201ENST00000422953 1114 ntBASIC4.23□□□□□ -1.73
RAE1P78406 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RAE1P78406 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.23□□□□□ -1.73
RAE1P78406 AL445669.1-201ENST00000426743 755 ntBASIC4.23□□□□□ -1.73
RAE1P78406 RPS3AP54-201ENST00000435535 734 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.23□□□□□ -1.73
RAE1P78406 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.23□□□□□ -1.73
RAE1P78406 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.23□□□□□ -1.73
RAE1P78406 AP000542.1-201ENST00000448473 371 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AL033528.1-201ENST00000453780 140 ntBASIC4.23□□□□□ -1.73
RAE1P78406 RPS27AP17-201ENST00000463344 455 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AC087312.1-201ENST00000471411 480 ntBASIC4.23□□□□□ -1.73
RAE1P78406 RPL7P24-201ENST00000493052 752 ntBASIC4.23□□□□□ -1.73
RAE1P78406 HMGB1P21-201ENST00000502313 581 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.23□□□□□ -1.73
RAE1P78406 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.23□□□□□ -1.73
RAE1P78406 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.23□□□□□ -1.73
RAE1P78406 AC022790.1-201ENST00000522872 204 ntBASIC4.23□□□□□ -1.73
RAE1P78406 OR5M7P-201ENST00000526140 972 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AC022878.1-201ENST00000530684 149 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RAE1P78406 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RAE1P78406 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.23□□□□□ -1.73
RAE1P78406 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.23□□□□□ -1.73
RAE1P78406 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.23□□□□□ -1.73
RAE1P78406 AC009063.1-201ENST00000563342 702 ntBASIC4.23□□□□□ -1.73
RAE1P78406 MTATP6P3-201ENST00000581686 676 ntBASIC4.23□□□□□ -1.73
RAE1P78406 BNIP3P8-201ENST00000597863 560 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AC113194.1-201ENST00000606037 500 ntBASIC4.23□□□□□ -1.73
RAE1P78406 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.23□□□□□ -1.73
RAE1P78406 AC108747.1-201ENST00000609508 535 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms