Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL049870.4-201ENST00000555741 486 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 AC023158.1-201ENST00000561632 1025 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.74□□□□□ -1.97
HIST1H3AP68431 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H3AP68431 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H3AP68431 ELOCP35-201ENST00000604289 336 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 AL390240.1-201ENST00000612950 384 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 U73479.1-201ENST00000618062 168 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 AC018692.3-201ENST00000623929 123 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H3AP68431 MIR622-201ENST00000638396 96 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 OR8B1P-202ENST00000641132 1178 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HIST1H3AP68431 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.74□□□□□ -1.97
HIST1H3AP68431 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.74□□□□□ -1.97
HIST1H3AP68431 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H3AP68431 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H3AP68431 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC073055.1-201ENST00000456901 1621 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 RNA5SP267-201ENST00000364893 126 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 SNORA46-201ENST00000384762 135 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 RNA5SP344-201ENST00000411081 104 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 RPS3AP25-201ENST00000411660 793 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AJ239321.1-201ENST00000424255 564 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC108734.1-201ENST00000439549 399 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 HSPE1P28-201ENST00000443139 211 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 RPS27P5-201ENST00000444247 244 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 VN1R34P-201ENST00000447387 883 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H3AP68431 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC022616.2-201ENST00000523185 300 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC074029.1-201ENST00000552531 1044 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AL049874.4-201ENST00000557593 255 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC004832.5-201ENST00000608677 401 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H3AP68431 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H3AP68431 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.73□□□□□ -1.97
HIST1H3AP68431 AC110774.1-201ENST00000623567 2018 ntBASIC2.73□□□□□ -1.97
HIST1H3AP68431 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HIST1H3AP68431 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H3AP68431 DEFB109C-201ENST00000382575 264 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 DEFB109B-201ENST00000382656 264 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 RPL21P3-201ENST00000395517 478 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC110754.1-201ENST00000399740 601 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HIST1H3AP68431 MRPL50P2-201ENST00000416821 482 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 HSPE1P1-201ENST00000421494 318 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC093151.1-201ENST00000427711 313 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 ARL4AP4-201ENST00000434170 518 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 RPL17P49-201ENST00000443728 411 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC146507.2-201ENST00000460608 476 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 RN7SL863P-201ENST00000462370 296 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 FTH1P2-201ENST00000466086 412 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 MTCO3P35-201ENST00000485582 781 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 ATG10-AS1-201ENST00000504846 648 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 HSPD1P15-201ENST00000505573 1122 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC108043.1-201ENST00000512696 574 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AP004371.1-201ENST00000525240 214 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 AL606834.2-201ENST00000602954 668 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AC091488.1-201ENST00000604239 660 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 MIR7112-201ENST00000616126 65 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 AP004607.9-201ENST00000618202 316 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 MIR6075-201ENST00000620782 95 ntBASIC2.72□□□□□ -1.97
HIST1H3AP68431 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.72□□□□□ -1.97
HIST1H3AP68431 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
HIST1H3AP68431 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
HIST1H3AP68431 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
HIST1H3AP68431 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 GTF2H2B-203ENST00000508065 1432 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H3AP68431 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H3AP68431 SNORD15B-201ENST00000384714 146 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 MIR7-3-201ENST00000384898 110 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms