Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 SNORA57.1-201ENST00000391227 145 ntBASIC1.83□□□□□ -2.12
RPS28P62857 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RPS28P62857 RN7SKP235-201ENST00000410662 305 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 VTA1P1-201ENST00000414044 866 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.83□□□□□ -2.12
RPS28P62857 UBE2V1P9-201ENST00000414760 368 ntBASIC1.83□□□□□ -2.12
RPS28P62857 NPM1P11-201ENST00000417106 855 ntBASIC1.83□□□□□ -2.12
RPS28P62857 BX842559.1-201ENST00000419615 532 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.83□□□□□ -2.12
RPS28P62857 AL513175.2-201ENST00000422071 443 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 SDCBPP2-201ENST00000424643 885 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AL445528.1-201ENST00000426330 420 ntBASIC1.83□□□□□ -2.12
RPS28P62857 GCA-203ENST00000429691 824 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 AC091286.1-201ENST00000431233 461 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AL139132.1-201ENST00000431587 344 ntBASIC1.83□□□□□ -2.12
RPS28P62857 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 RPL34P20-201ENST00000442771 351 ntBASIC1.83□□□□□ -2.12
RPS28P62857 GPM6BP3-201ENST00000442797 145 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC004022.1-201ENST00000447766 1066 ntBASIC1.83□□□□□ -2.12
RPS28P62857 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 RPL37P23-201ENST00000492641 294 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC231760.1-201ENST00000498002 260 ntBASIC1.83□□□□□ -2.12
RPS28P62857 RN7SKP238-201ENST00000516483 249 ntBASIC1.83□□□□□ -2.12
RPS28P62857 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
RPS28P62857 SNORA43.3-201ENST00000517240 103 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC1.83□□□□□ -2.12
RPS28P62857 UBE2FP2-201ENST00000566646 462 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC1.83□□□□□ -2.12
RPS28P62857 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 AC011471.1-201ENST00000585766 187 ntBASIC1.83□□□□□ -2.12
RPS28P62857 MIR212-201ENST00000586026 110 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 AC015802.2-201ENST00000589690 189 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC005498.1-201ENST00000592125 465 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AL355877.2-201ENST00000603670 358 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC006077.1-201ENST00000604746 343 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC091903.1-201ENST00000624322 454 ntBASIC1.83□□□□□ -2.12
RPS28P62857 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 ZNRD1ASP-221ENST00000637794 1074 ntBASIC1.83□□□□□ -2.12
RPS28P62857 AC010325.3-201ENST00000641084 394 ntBASIC1.83□□□□□ -2.12
RPS28P62857 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 AC007656.2-201ENST00000624902 4547 ntBASIC1.83□□□□□ -2.12
RPS28P62857 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RPS28P62857 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RPS28P62857 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RPS28P62857 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
RPS28P62857 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.83□□□□□ -2.12
RPS28P62857 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RPS28P62857 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RPS28P62857 AL359851.1-201ENST00000569460 4997 ntBASIC1.82□□□□□ -2.12
RPS28P62857 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 AC131971.1-201ENST00000332881 1482 ntBASIC1.82□□□□□ -2.12
RPS28P62857 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 RPL9P7-201ENST00000330965 580 ntBASIC1.82□□□□□ -2.12
RPS28P62857 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 RNA5SP319-201ENST00000362768 119 ntBASIC1.82□□□□□ -2.12
RPS28P62857 RNA5SP399-201ENST00000364003 117 ntBASIC1.82□□□□□ -2.12
RPS28P62857 RNA5SP394-201ENST00000364216 119 ntBASIC1.82□□□□□ -2.12
RPS28P62857 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS28P62857 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPS28P62857 SNORA11F-201ENST00000408237 128 ntBASIC1.82□□□□□ -2.12
RPS28P62857 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC1.82□□□□□ -2.12
RPS28P62857 LINC01347-201ENST00000417964 355 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AC012065.2-201ENST00000421295 375 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AL365496.1-201ENST00000426885 215 ntBASIC1.82□□□□□ -2.12
RPS28P62857 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.82□□□□□ -2.12
RPS28P62857 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC1.82□□□□□ -2.12
RPS28P62857 AL035458.1-201ENST00000433096 585 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AC012075.1-201ENST00000436549 580 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AC004866.2-201ENST00000438285 481 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AL592114.2-201ENST00000440142 532 ntBASIC1.82□□□□□ -2.12
RPS28P62857 RPS12P18-201ENST00000442381 270 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC1.82□□□□□ -2.12
RPS28P62857 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
RPS28P62857 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC1.82□□□□□ -2.12
RPS28P62857 WASF1P1-201ENST00000447560 1131 ntBASIC1.82□□□□□ -2.12
RPS28P62857 NANOGNBP1-201ENST00000448444 480 ntBASIC1.82□□□□□ -2.12
RPS28P62857 PSPHP1-201ENST00000450062 261 ntBASIC1.82□□□□□ -2.12
RPS28P62857 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.82□□□□□ -2.12
RPS28P62857 AC022034.3-201ENST00000471393 478 ntBASIC1.82□□□□□ -2.12
RPS28P62857 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
RPS28P62857 RN7SL633P-201ENST00000488974 297 ntBASIC1.82□□□□□ -2.12
RPS28P62857 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.82□□□□□ -2.12
RPS28P62857 RPS27P27-201ENST00000498779 255 ntBASIC1.82□□□□□ -2.12
RPS28P62857 MTND4LP2-201ENST00000502312 285 ntBASIC1.82□□□□□ -2.12
RPS28P62857 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms