Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNU1-33P-201ENST00000364249 162 ntBASIC2.41□□□□□ -2.02
LSM3P62310 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LSM3P62310 HMGN2P35-201ENST00000412164 270 ntBASIC2.41□□□□□ -2.02
LSM3P62310 AC245052.5-201ENST00000416320 649 ntBASIC2.41□□□□□ -2.02
LSM3P62310 AC073310.1-201ENST00000423226 1033 ntBASIC2.41□□□□□ -2.02
LSM3P62310 AC093392.2-201ENST00000450682 337 ntBASIC2.41□□□□□ -2.02
LSM3P62310 NIPA2P5-201ENST00000452282 464 ntBASIC2.41□□□□□ -2.02
LSM3P62310 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
LSM3P62310 NDUFA5P9-201ENST00000472609 340 ntBASIC2.41□□□□□ -2.02
LSM3P62310 OR2A20P-203ENST00000498397 1268 ntBASIC2.41□□□□□ -2.02
LSM3P62310 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.41□□□□□ -2.02
LSM3P62310 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM3P62310 AC093755.1-201ENST00000512950 1023 ntBASIC2.41□□□□□ -2.02
LSM3P62310 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
LSM3P62310 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.41□□□□□ -2.02
LSM3P62310 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.41□□□□□ -2.02
LSM3P62310 OR8L1P-201ENST00000534005 955 ntBASIC2.41□□□□□ -2.02
LSM3P62310 AC123904.3-201ENST00000547218 814 ntBASIC2.41□□□□□ -2.02
LSM3P62310 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM3P62310 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM3P62310 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.41□□□□□ -2.02
LSM3P62310 AL109653.1-201ENST00000603091 248 ntBASIC2.41□□□□□ -2.02
LSM3P62310 RPL23AP61-201ENST00000623642 466 ntBASIC2.41□□□□□ -2.02
LSM3P62310 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
LSM3P62310 CUL1P1-201ENST00000509510 2425 ntBASIC2.41□□□□□ -2.02
LSM3P62310 AC024341.1-201ENST00000526444 1552 ntBASIC2.4□□□□□ -2.02
LSM3P62310 AC002546.1-201ENST00000588041 2504 ntBASIC2.4□□□□□ -2.02
LSM3P62310 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LSM3P62310 MTND4P34-201ENST00000572715 1371 ntBASIC2.4□□□□□ -2.02
LSM3P62310 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LSM3P62310 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
LSM3P62310 RNA5SP295-201ENST00000362655 121 ntBASIC2.4□□□□□ -2.03
LSM3P62310 VTRNA1-1-201ENST00000363120 99 ntBASIC2.4□□□□□ -2.03
LSM3P62310 RNVU1-3-201ENST00000364313 161 ntBASIC2.4□□□□□ -2.03
LSM3P62310 RN7SKP220-201ENST00000410611 288 ntBASIC2.4□□□□□ -2.03
LSM3P62310 HSPE1P1-201ENST00000421494 318 ntBASIC2.4□□□□□ -2.03
LSM3P62310 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.4□□□□□ -2.03
LSM3P62310 RSL24D1P6-201ENST00000426934 401 ntBASIC2.4□□□□□ -2.03
LSM3P62310 AC129850.1-201ENST00000436203 508 ntBASIC2.4□□□□□ -2.03
LSM3P62310 AL031663.1-201ENST00000437445 219 ntBASIC2.4□□□□□ -2.03
LSM3P62310 HMGB1P12-201ENST00000438594 598 ntBASIC2.4□□□□□ -2.03
LSM3P62310 RPL7P52-201ENST00000449200 742 ntBASIC2.4□□□□□ -2.03
LSM3P62310 Z99714.1-201ENST00000450463 807 ntBASIC2.4□□□□□ -2.03
LSM3P62310 OR6C72P-201ENST00000451403 892 ntBASIC2.4□□□□□ -2.03
LSM3P62310 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.4□□□□□ -2.03
LSM3P62310 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
LSM3P62310 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.4□□□□□ -2.03
LSM3P62310 RPS3AP43-201ENST00000479743 781 ntBASIC2.4□□□□□ -2.03
LSM3P62310 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.4□□□□□ -2.03
LSM3P62310 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.4□□□□□ -2.03
LSM3P62310 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.4□□□□□ -2.03
LSM3P62310 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.4□□□□□ -2.03
LSM3P62310 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.4□□□□□ -2.03
LSM3P62310 AC100870.1-201ENST00000522035 505 ntBASIC2.4□□□□□ -2.03
LSM3P62310 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.4□□□□□ -2.03
LSM3P62310 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.4□□□□□ -2.03
LSM3P62310 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.4□□□□□ -2.03
LSM3P62310 TPMTP1-201ENST00000592307 737 ntBASIC2.4□□□□□ -2.03
LSM3P62310 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.39□□□□□ -2.03
LSM3P62310 Y_RNA.62-201ENST00000362840 99 ntBASIC2.39□□□□□ -2.03
LSM3P62310 SNORA71.1-201ENST00000364523 117 ntBASIC2.39□□□□□ -2.03
LSM3P62310 SAR1AP2-201ENST00000392696 594 ntBASIC2.39□□□□□ -2.03
LSM3P62310 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LSM3P62310 CASKP1-201ENST00000412870 582 ntBASIC2.39□□□□□ -2.03
LSM3P62310 SSXP9-201ENST00000417503 292 ntBASIC2.39□□□□□ -2.03
LSM3P62310 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.39□□□□□ -2.03
LSM3P62310 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.39□□□□□ -2.03
LSM3P62310 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.39□□□□□ -2.03
LSM3P62310 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.39□□□□□ -2.03
LSM3P62310 AL359073.1-201ENST00000448036 403 ntBASIC2.39□□□□□ -2.03
LSM3P62310 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.39□□□□□ -2.03
LSM3P62310 RPL27AP5-201ENST00000469428 449 ntBASIC2.39□□□□□ -2.03
LSM3P62310 AC068724.1-201ENST00000487100 792 ntBASIC2.39□□□□□ -2.03
LSM3P62310 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LSM3P62310 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.39□□□□□ -2.03
LSM3P62310 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LSM3P62310 MTND4LP31-201ENST00000514859 294 ntBASIC2.39□□□□□ -2.03
LSM3P62310 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.39□□□□□ -2.03
LSM3P62310 SCGB1D5P-201ENST00000515134 247 ntBASIC2.39□□□□□ -2.03
LSM3P62310 AC009812.2-201ENST00000517657 457 ntBASIC2.39□□□□□ -2.03
LSM3P62310 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.39□□□□□ -2.03
LSM3P62310 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.39□□□□□ -2.03
LSM3P62310 MIR4474-201ENST00000579189 78 ntBASIC2.39□□□□□ -2.03
LSM3P62310 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
LSM3P62310 MIR4635-201ENST00000583759 79 ntBASIC2.39□□□□□ -2.03
LSM3P62310 SNRPGP15-201ENST00000600149 222 ntBASIC2.39□□□□□ -2.03
LSM3P62310 AC004696.1-201ENST00000614345 607 ntBASIC2.39□□□□□ -2.03
LSM3P62310 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.39□□□□□ -2.03
LSM3P62310 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.39□□□□□ -2.03
LSM3P62310 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.39□□□□□ -2.03
LSM3P62310 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.39□□□□□ -2.03
LSM3P62310 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LSM3P62310 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
LSM3P62310 METTL21EP-201ENST00000298105 713 ntBASIC2.38□□□□□ -2.03
LSM3P62310 RNU6-1251P-201ENST00000364502 107 ntBASIC2.38□□□□□ -2.03
LSM3P62310 AC068538.1-201ENST00000376856 336 ntBASIC2.38□□□□□ -2.03
LSM3P62310 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LSM3P62310 MIR142-201ENST00000384835 87 ntBASIC2.38□□□□□ -2.03
LSM3P62310 RNU6-233P-201ENST00000410845 141 ntBASIC2.38□□□□□ -2.03
LSM3P62310 RNU4-47P-201ENST00000410876 114 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms