Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.23□□□□□ -1.89
NUP98P52948 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.23□□□□□ -1.89
NUP98P52948 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP98P52948 AC008277.2-201ENST00000605196 797 ntBASIC3.23□□□□□ -1.89
NUP98P52948 AC078899.5-201ENST00000612475 178 ntBASIC3.23□□□□□ -1.89
NUP98P52948 AC025034.2-201ENST00000623264 286 ntBASIC3.23□□□□□ -1.89
NUP98P52948 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
NUP98P52948 CUL4AP1-201ENST00000514750 1863 ntBASIC3.22□□□□□ -1.89
NUP98P52948 MIR518C-201ENST00000384822 101 ntBASIC3.22□□□□□ -1.89
NUP98P52948 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.22□□□□□ -1.89
NUP98P52948 RNA5SP425-201ENST00000410336 112 ntBASIC3.22□□□□□ -1.89
NUP98P52948 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP98P52948 AL356806.1-201ENST00000422524 916 ntBASIC3.22□□□□□ -1.89
NUP98P52948 OR2B8P-201ENST00000432841 938 ntBASIC3.22□□□□□ -1.89
NUP98P52948 AL357520.1-201ENST00000441557 453 ntBASIC3.22□□□□□ -1.89
NUP98P52948 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.22□□□□□ -1.89
NUP98P52948 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.22□□□□□ -1.89
NUP98P52948 AC008280.2-201ENST00000455473 307 ntBASIC3.22□□□□□ -1.89
NUP98P52948 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.22□□□□□ -1.89
NUP98P52948 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.22□□□□□ -1.89
NUP98P52948 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.22□□□□□ -1.89
NUP98P52948 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.22□□□□□ -1.89
NUP98P52948 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP98P52948 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.22□□□□□ -1.89
NUP98P52948 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.22□□□□□ -1.89
NUP98P52948 HMGB3P26-201ENST00000560051 582 ntBASIC3.22□□□□□ -1.89
NUP98P52948 AL359757.2-201ENST00000624309 274 ntBASIC3.22□□□□□ -1.89
NUP98P52948 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
NUP98P52948 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
NUP98P52948 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
NUP98P52948 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.22□□□□□ -1.89
NUP98P52948 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP98P52948 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
NUP98P52948 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.21□□□□□ -1.89
NUP98P52948 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.21□□□□□ -1.89
NUP98P52948 RPL23AP74-201ENST00000437246 471 ntBASIC3.21□□□□□ -1.89
NUP98P52948 HMGB3P8-201ENST00000449709 577 ntBASIC3.21□□□□□ -1.89
NUP98P52948 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.21□□□□□ -1.89
NUP98P52948 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.21□□□□□ -1.89
NUP98P52948 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.21□□□□□ -1.89
NUP98P52948 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.21□□□□□ -1.89
NUP98P52948 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.21□□□□□ -1.89
NUP98P52948 SNORD53-201ENST00000579969 78 ntBASIC3.21□□□□□ -1.89
NUP98P52948 AC079228.1-201ENST00000624774 1049 ntBASIC3.21□□□□□ -1.89
NUP98P52948 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NUP98P52948 AC087565.3-202ENST00000642085 1603 ntBASIC3.21□□□□□ -1.9
NUP98P52948 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
NUP98P52948 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.21□□□□□ -1.9
NUP98P52948 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NUP98P52948 SNORA70E-201ENST00000384492 135 ntBASIC3.21□□□□□ -1.9
NUP98P52948 MIR592-201ENST00000384959 97 ntBASIC3.21□□□□□ -1.9
NUP98P52948 MIR27B-201ENST00000385129 97 ntBASIC3.21□□□□□ -1.9
NUP98P52948 AL359511.1-201ENST00000402970 211 ntBASIC3.21□□□□□ -1.9
NUP98P52948 NANOGP5-201ENST00000424456 877 ntBASIC3.21□□□□□ -1.9
NUP98P52948 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.21□□□□□ -1.9
NUP98P52948 OR6K1P-201ENST00000456766 971 ntBASIC3.21□□□□□ -1.9
NUP98P52948 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.21□□□□□ -1.9
NUP98P52948 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.21□□□□□ -1.9
NUP98P52948 KCTD9P5-201ENST00000504141 1170 ntBASIC3.21□□□□□ -1.9
NUP98P52948 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.9
NUP98P52948 COX6B1P6-201ENST00000522347 255 ntBASIC3.21□□□□□ -1.9
NUP98P52948 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.21□□□□□ -1.9
NUP98P52948 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.21□□□□□ -1.9
NUP98P52948 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.21□□□□□ -1.9
NUP98P52948 AC138915.3-201ENST00000562908 1389 ntBASIC3.21□□□□□ -1.9
NUP98P52948 AC104763.2-201ENST00000604179 382 ntBASIC3.21□□□□□ -1.9
NUP98P52948 AC087241.4-201ENST00000612441 480 ntBASIC3.21□□□□□ -1.9
NUP98P52948 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.21□□□□□ -1.9
NUP98P52948 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.21□□□□□ -1.9
NUP98P52948 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.2□□□□□ -1.9
NUP98P52948 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NUP98P52948 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NUP98P52948 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NUP98P52948 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
NUP98P52948 RN7SKP192-201ENST00000411291 327 ntBASIC3.2□□□□□ -1.9
NUP98P52948 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.2□□□□□ -1.9
NUP98P52948 AL049610.1-201ENST00000423374 372 ntBASIC3.2□□□□□ -1.9
NUP98P52948 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.2□□□□□ -1.9
NUP98P52948 AL139415.2-201ENST00000431968 163 ntBASIC3.2□□□□□ -1.9
NUP98P52948 AC245517.2-201ENST00000442890 346 ntBASIC3.2□□□□□ -1.9
NUP98P52948 AC008549.1-201ENST00000512900 643 ntBASIC3.2□□□□□ -1.9
NUP98P52948 AP003102.1-201ENST00000525638 661 ntBASIC3.2□□□□□ -1.9
NUP98P52948 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.2□□□□□ -1.9
NUP98P52948 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
NUP98P52948 AC103810.6-201ENST00000606708 136 ntBASIC3.2□□□□□ -1.9
NUP98P52948 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NUP98P52948 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
NUP98P52948 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NUP98P52948 AC069218.2-201ENST00000411665 344 ntBASIC3.19□□□□□ -1.9
NUP98P52948 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP98P52948 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP98P52948 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP98P52948 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP98P52948 RN7SL636P-201ENST00000497504 294 ntBASIC3.19□□□□□ -1.9
NUP98P52948 YWHAEP4-201ENST00000505390 198 ntBASIC3.19□□□□□ -1.9
NUP98P52948 AL133271.1-201ENST00000538229 291 ntBASIC3.19□□□□□ -1.9
NUP98P52948 AL157394.1-201ENST00000562983 1224 ntBASIC3.19□□□□□ -1.9
NUP98P52948 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP98P52948 AC136601.2-201ENST00000604356 474 ntBASIC3.19□□□□□ -1.9
NUP98P52948 SNORA35B-201ENST00000607417 129 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms