Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
GTF2A1P52655 AC104619.4-201ENST00000510773 249 ntBASIC2.87□□□□□ -1.95
GTF2A1P52655 AC008716.1-201ENST00000511084 513 ntBASIC2.87□□□□□ -1.95
GTF2A1P52655 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.87□□□□□ -1.95
GTF2A1P52655 AP000790.1-201ENST00000528891 737 ntBASIC2.87□□□□□ -1.95
GTF2A1P52655 AC103843.2-201ENST00000530523 682 ntBASIC2.87□□□□□ -1.95
GTF2A1P52655 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.87□□□□□ -1.95
GTF2A1P52655 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.87□□□□□ -1.95
GTF2A1P52655 PRELID2P1-201ENST00000552837 301 ntBASIC2.87□□□□□ -1.95
GTF2A1P52655 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
GTF2A1P52655 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.87□□□□□ -1.95
GTF2A1P52655 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
GTF2A1P52655 AL133507.1-201ENST00000605269 557 ntBASIC2.87□□□□□ -1.95
GTF2A1P52655 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.87□□□□□ -1.95
GTF2A1P52655 AC007275.1-201ENST00000621243 671 ntBASIC2.87□□□□□ -1.95
GTF2A1P52655 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.87□□□□□ -1.95
GTF2A1P52655 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
GTF2A1P52655 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
GTF2A1P52655 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GTF2A1P52655 PABPC1P9-201ENST00000426076 1612 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
GTF2A1P52655 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.86□□□□□ -1.95
GTF2A1P52655 Z82209.1-201ENST00000422141 2135 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
GTF2A1P52655 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AL672167.1-206ENST00000356293 943 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 RNU6-799P-201ENST00000363567 107 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 SNORA67.1-201ENST00000364749 141 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 RN7SKP111-201ENST00000410349 271 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GTF2A1P52655 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AC244098.2-201ENST00000422068 99 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 AL513175.2-201ENST00000422071 443 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
GTF2A1P52655 HMGN2P30-201ENST00000423237 256 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.86□□□□□ -1.95
GTF2A1P52655 RPL21P66-201ENST00000426566 466 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 C4BPAP2-201ENST00000428434 478 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 ATP5C1P1-201ENST00000441945 895 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AC234775.1-201ENST00000454247 670 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 RN7SL20P-201ENST00000488827 297 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.86□□□□□ -1.95
GTF2A1P52655 VN1R104P-201ENST00000505115 1009 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GTF2A1P52655 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.86□□□□□ -1.95
GTF2A1P52655 SNORA31.1-201ENST00000515993 133 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 SNORA31.5-201ENST00000516190 133 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.86□□□□□ -1.95
GTF2A1P52655 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.86□□□□□ -1.95
GTF2A1P52655 NOP56P3-201ENST00000549457 385 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.86□□□□□ -1.95
GTF2A1P52655 ZNF415P1-201ENST00000582279 1166 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.86□□□□□ -1.95
GTF2A1P52655 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 AF230666.2-201ENST00000602328 725 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.86□□□□□ -1.95
GTF2A1P52655 AC005972.3-201ENST00000606304 481 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 AC006111.3-201ENST00000622137 383 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.86□□□□□ -1.95
GTF2A1P52655 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GTF2A1P52655 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
GTF2A1P52655 MTCO1P24-201ENST00000515438 1558 ntBASIC2.86□□□□□ -1.95
GTF2A1P52655 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
GTF2A1P52655 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.85□□□□□ -1.95
GTF2A1P52655 ZNF734P-201ENST00000419494 1534 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
GTF2A1P52655 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
GTF2A1P52655 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
GTF2A1P52655 SNORD21-201ENST00000383953 95 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 GSTA8P-201ENST00000404253 637 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.85□□□□□ -1.95
GTF2A1P52655 RPL23AP74-201ENST00000437246 471 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 ARL5AP2-201ENST00000444698 533 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 AC009220.1-201ENST00000451614 275 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.85□□□□□ -1.95
GTF2A1P52655 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.85□□□□□ -1.95
GTF2A1P52655 IGLV3-17-201ENST00000519099 244 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 OR8L1P-201ENST00000534005 955 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.85□□□□□ -1.95
GTF2A1P52655 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.85□□□□□ -1.95
GTF2A1P52655 AC092868.3-201ENST00000560515 784 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.85□□□□□ -1.95
GTF2A1P52655 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.85□□□□□ -1.95
GTF2A1P52655 AC067959.1-201ENST00000604334 379 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 AL162713.1-201ENST00000604480 262 ntBASIC2.85□□□□□ -1.95
GTF2A1P52655 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.85□□□□□ -1.95
GTF2A1P52655 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
GTF2A1P52655 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
GTF2A1P52655 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.85□□□□□ -1.95
GTF2A1P52655 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
GTF2A1P52655 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
GTF2A1P52655 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
GTF2A1P52655 AC026951.1-201ENST00000559530 2459 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms