Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR7154-201ENST00000620673 73 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC055839.1-201ENST00000634467 498 ntBASIC4.66□□□□□ -1.66
NEK3P51956 MIR3974-201ENST00000637126 96 ntBASIC4.66□□□□□ -1.66
NEK3P51956 AC138649.5-201ENST00000637456 137 ntBASIC4.66□□□□□ -1.66
NEK3P51956 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.66□□□□□ -1.66
NEK3P51956 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
NEK3P51956 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.66□□□□□ -1.66
NEK3P51956 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NEK3P51956 AL031985.3-201ENST00000565390 2449 ntBASIC4.66□□□□□ -1.66
NEK3P51956 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.66□□□□□ -1.66
NEK3P51956 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.66□□□□□ -1.66
NEK3P51956 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEK3P51956 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NEK3P51956 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.65□□□□□ -1.66
NEK3P51956 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NEK3P51956 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
NEK3P51956 AC125257.1-201ENST00000560400 2930 ntBASIC4.65□□□□□ -1.66
NEK3P51956 AC004925.1-201ENST00000624256 2706 ntBASIC4.65□□□□□ -1.66
NEK3P51956 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NEK3P51956 AL672167.1-206ENST00000356293 943 ntBASIC4.65□□□□□ -1.67
NEK3P51956 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.65□□□□□ -1.67
NEK3P51956 MIR708-201ENST00000390708 88 ntBASIC4.65□□□□□ -1.67
NEK3P51956 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NEK3P51956 RNU6-712P-201ENST00000410558 100 ntBASIC4.65□□□□□ -1.67
NEK3P51956 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NEK3P51956 HMGB1P11-201ENST00000413899 637 ntBASIC4.65□□□□□ -1.67
NEK3P51956 EIF4EP1-201ENST00000422311 642 ntBASIC4.65□□□□□ -1.67
NEK3P51956 RPS27AP7-201ENST00000422792 455 ntBASIC4.65□□□□□ -1.67
NEK3P51956 RPS3AP54-201ENST00000435535 734 ntBASIC4.65□□□□□ -1.67
NEK3P51956 AL831737.1-201ENST00000441288 271 ntBASIC4.65□□□□□ -1.67
NEK3P51956 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.65□□□□□ -1.67
NEK3P51956 AC034222.1-201ENST00000494052 532 ntBASIC4.65□□□□□ -1.67
NEK3P51956 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.65□□□□□ -1.67
NEK3P51956 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.65□□□□□ -1.67
NEK3P51956 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.65□□□□□ -1.67
NEK3P51956 AC005921.1-201ENST00000510589 286 ntBASIC4.65□□□□□ -1.67
NEK3P51956 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.65□□□□□ -1.67
NEK3P51956 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.65□□□□□ -1.67
NEK3P51956 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.65□□□□□ -1.67
NEK3P51956 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.65□□□□□ -1.67
NEK3P51956 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.65□□□□□ -1.67
NEK3P51956 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.65□□□□□ -1.67
NEK3P51956 AC006270.2-201ENST00000578523 652 ntBASIC4.65□□□□□ -1.67
NEK3P51956 MIR4284-201ENST00000578924 81 ntBASIC4.65□□□□□ -1.67
NEK3P51956 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.65□□□□□ -1.67
NEK3P51956 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.65□□□□□ -1.67
NEK3P51956 Z99497.2-201ENST00000603634 310 ntBASIC4.65□□□□□ -1.67
NEK3P51956 AC114878.2-201ENST00000604863 1251 ntBASIC4.65□□□□□ -1.67
NEK3P51956 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.65□□□□□ -1.67
NEK3P51956 AC004908.3-201ENST00000610248 625 ntBASIC4.65□□□□□ -1.67
NEK3P51956 MIR378J-201ENST00000611988 109 ntBASIC4.65□□□□□ -1.67
NEK3P51956 AL133243.1-201ENST00000614487 366 ntBASIC4.65□□□□□ -1.67
NEK3P51956 AC018755.4-201ENST00000619715 454 ntBASIC4.65□□□□□ -1.67
NEK3P51956 C2orf27A-204ENST00000623058 969 ntBASIC4.65□□□□□ -1.67
NEK3P51956 AF246928.1-201ENST00000623768 87 ntBASIC4.65□□□□□ -1.67
NEK3P51956 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.65□□□□□ -1.67
NEK3P51956 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.65□□□□□ -1.67
NEK3P51956 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
NEK3P51956 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NEK3P51956 OR11H5P-202ENST00000641612 1325 ntBASIC4.65□□□□□ -1.67
NEK3P51956 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NEK3P51956 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.65□□□□□ -1.67
NEK3P51956 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 RNU1-108P-201ENST00000362556 161 ntBASIC4.64□□□□□ -1.67
NEK3P51956 RNU6-289P-201ENST00000364093 107 ntBASIC4.64□□□□□ -1.67
NEK3P51956 Y_RNA.234-201ENST00000364409 97 ntBASIC4.64□□□□□ -1.67
NEK3P51956 RNA5SP189-201ENST00000364920 115 ntBASIC4.64□□□□□ -1.67
NEK3P51956 MTCO1P17-201ENST00000411522 491 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.64□□□□□ -1.67
NEK3P51956 RPL21P112-201ENST00000434403 463 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 OR6C5P-201ENST00000452388 923 ntBASIC4.64□□□□□ -1.67
NEK3P51956 Z82190.1-201ENST00000454534 490 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 RPS20P32-201ENST00000456044 356 ntBASIC4.64□□□□□ -1.67
NEK3P51956 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 SCARNA10-201ENST00000459255 330 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AC091564.1-201ENST00000464563 479 ntBASIC4.64□□□□□ -1.67
NEK3P51956 RN7SL860P-201ENST00000473738 223 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AP001025.2-201ENST00000490908 477 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.64□□□□□ -1.67
NEK3P51956 Y_RNA.688-201ENST00000516565 95 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.64□□□□□ -1.67
NEK3P51956 IGLV3-26-201ENST00000520756 302 ntBASIC4.64□□□□□ -1.67
NEK3P51956 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 MTCYBP41-201ENST00000528913 1123 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AP004247.1-201ENST00000531556 1289 ntBASIC4.64□□□□□ -1.67
NEK3P51956 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NEK3P51956 AC009643.1-201ENST00000532030 391 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms