Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HCFC1P51610 AL356489.2-201ENST00000566968 3528 ntBASIC3.33□□□□□ -1.88
HCFC1P51610 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HCFC1P51610 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.33□□□□□ -1.88
HCFC1P51610 AL391994.1-201ENST00000254724 282 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HCFC1P51610 RNU4-40P-201ENST00000364351 143 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.32□□□□□ -1.88
HCFC1P51610 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 AL356131.1-201ENST00000405826 414 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.32□□□□□ -1.88
HCFC1P51610 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 AC011233.1-201ENST00000422812 283 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 Z74696.2-201ENST00000436514 498 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AC127537.2-201ENST00000439258 465 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC022431.1-201ENST00000450941 438 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 BX248409.1-201ENST00000455497 255 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC006511.1-201ENST00000470614 315 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 RPL23AP71-201ENST00000470966 469 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AC108734.3-201ENST00000481241 1165 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 SETP14-201ENST00000497538 873 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC008802.1-201ENST00000519121 791 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.32□□□□□ -1.88
HCFC1P51610 DUXAP11-201ENST00000603858 526 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.32□□□□□ -1.88
HCFC1P51610 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HCFC1P51610 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.32□□□□□ -1.88
HCFC1P51610 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.32□□□□□ -1.88
HCFC1P51610 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 AC010300.1-201ENST00000600671 5134 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
HCFC1P51610 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.32□□□□□ -1.88
HCFC1P51610 AL512646.1-201ENST00000269395 1077 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HCFC1P51610 SNORD116-1-201ENST00000384335 95 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 MIR1251-201ENST00000408552 70 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC090960.1-201ENST00000421072 306 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 Z93242.1-201ENST00000427102 353 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 RPL31P54-201ENST00000429803 370 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.32□□□□□ -1.88
HCFC1P51610 BX510359.1-201ENST00000456973 237 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.32□□□□□ -1.88
HCFC1P51610 RPL30P6-201ENST00000475925 342 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 AC005832.3-201ENST00000537929 631 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.32□□□□□ -1.88
HCFC1P51610 AL442163.2-201ENST00000553912 710 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 SULT1C2P2-201ENST00000562517 294 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AC138915.2-201ENST00000569776 97 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 AC015688.2-201ENST00000584523 262 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 MIR3922-201ENST00000585192 84 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC1P51610 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 MTND5P1-201ENST00000445440 1375 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 MTND4P8-201ENST00000514997 1362 ntBASIC3.32□□□□□ -1.88
HCFC1P51610 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC1P51610 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC1P51610 AC097504.1-201ENST00000515103 2415 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC1P51610 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC1P51610 BX005019.1-201ENST00000561881 1810 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 RNU6-1200P-201ENST00000384162 107 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC1P51610 MTND4P22-201ENST00000413116 1169 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 GTF2IP23-201ENST00000423746 351 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 RPL7P44-201ENST00000424827 742 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 IPMKP1-201ENST00000425988 855 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.31□□□□□ -1.88
HCFC1P51610 ATP5HP2-201ENST00000433885 485 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AL034418.1-201ENST00000448675 860 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 RSL24D1P3-201ENST00000449255 495 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 APOOP2-201ENST00000461561 539 ntBASIC3.31□□□□□ -1.88
HCFC1P51610 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC1P51610 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms