Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AP001992.1-205ENST00000462248 379 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 AC146507.1-201ENST00000468335 354 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 AC093663.2-201ENST00000484625 313 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFSF9P41273 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFSF9P41273 MTCO1P30-201ENST00000515244 580 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 RNA5SP341-201ENST00000516261 117 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFSF9P41273 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFSF9P41273 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFSF9P41273 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFSF9P41273 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFSF9P41273 AL121603.1-201ENST00000553815 142 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 AL442163.2-201ENST00000553912 710 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFSF9P41273 MTATP6P25-201ENST00000574491 261 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 MIR4325-201ENST00000583049 90 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFSF9P41273 AC135507.2-201ENST00000612443 309 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 ATP5A1P2-202ENST00000616464 443 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFSF9P41273 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFSF9P41273 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFSF9P41273 AC093908.1-201ENST00000623125 8092 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFSF9P41273 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFSF9P41273 AL365361.1-201ENST00000566942 3481 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFSF9P41273 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TNFSF9P41273 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFSF9P41273 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TNFSF9P41273 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFSF9P41273 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFSF9P41273 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFSF9P41273 AC110754.1-201ENST00000399740 601 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 BTBD10P2-201ENST00000404779 676 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFSF9P41273 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFSF9P41273 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.36□□□□□ -1.87
TNFSF9P41273 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFSF9P41273 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFSF9P41273 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TNFSF9P41273 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TNFSF9P41273 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFSF9P41273 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.36□□□□□ -1.87
TNFSF9P41273 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFSF9P41273 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFSF9P41273 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFSF9P41273 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFSF9P41273 CKS1BP1-201ENST00000555221 240 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFSF9P41273 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFSF9P41273 YWHAQP7-201ENST00000603536 658 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 KATNBL1P1-201ENST00000605192 748 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 HMGN2P28-201ENST00000606102 262 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFSF9P41273 AC008121.2-201ENST00000614647 523 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 SCARNA15.3-201ENST00000626315 122 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 SCARNA4.1-201ENST00000628597 123 ntBASIC3.36□□□□□ -1.87
TNFSF9P41273 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TNFSF9P41273 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TNFSF9P41273 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFSF9P41273 MIR422A-201ENST00000362286 90 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 SNORD56.3-201ENST00000363507 71 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 SKINT1L-201ENST00000401057 817 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AL353692.2-201ENST00000407054 335 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AC006960.1-201ENST00000419980 153 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AC023128.2-201ENST00000420880 1223 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AC093698.1-201ENST00000423843 571 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFSF9P41273 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFSF9P41273 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AC126121.1-201ENST00000482313 553 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFSF9P41273 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFSF9P41273 SNORA64.4-201ENST00000516632 81 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AC010306.1-201ENST00000523223 1117 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TNFSF9P41273 AP004242.1-201ENST00000533701 349 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AP003717.3-201ENST00000544832 1180 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 SERPINE4P-201ENST00000554978 281 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AC006539.2-201ENST00000601729 572 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 AC011816.2-201ENST00000607089 556 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFSF9P41273 AC022079.2-201ENST00000619739 566 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFSF9P41273 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFSF9P41273 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TNFSF9P41273 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TNFSF9P41273 GABPAP-201ENST00000419271 1356 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms