Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC100793.4-201ENST00000613683 429 ntBASIC3.11□□□□□ -1.91
RPA3P35244 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.11□□□□□ -1.91
RPA3P35244 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
RPA3P35244 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPA3P35244 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPA3P35244 AC093010.3-201ENST00000570269 15214 ntBASIC3.11□□□□□ -1.91
RPA3P35244 AC000367.1-201ENST00000452711 1766 ntBASIC3.1□□□□□ -1.91
RPA3P35244 XPOTP1-201ENST00000443317 2398 ntBASIC3.1□□□□□ -1.91
RPA3P35244 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPA3P35244 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPA3P35244 AC092326.2-201ENST00000624772 1561 ntBASIC3.1□□□□□ -1.91
RPA3P35244 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPA3P35244 SNORD46.1-201ENST00000364139 104 ntBASIC3.1□□□□□ -1.91
RPA3P35244 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPA3P35244 MIR142-201ENST00000384835 87 ntBASIC3.1□□□□□ -1.91
RPA3P35244 XKRYP4-201ENST00000414395 483 ntBASIC3.1□□□□□ -1.91
RPA3P35244 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
RPA3P35244 MTND2P16-201ENST00000419987 799 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
RPA3P35244 RPL23AP69-201ENST00000431134 458 ntBASIC3.1□□□□□ -1.91
RPA3P35244 USP9YP31-201ENST00000431405 881 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AC108734.1-201ENST00000439549 399 ntBASIC3.1□□□□□ -1.91
RPA3P35244 HMGB1P48-201ENST00000446155 598 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AL590399.6-201ENST00000446396 307 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.1□□□□□ -1.91
RPA3P35244 AC104978.1-201ENST00000449387 391 ntBASIC3.1□□□□□ -1.91
RPA3P35244 XKRYP5-201ENST00000449659 483 ntBASIC3.1□□□□□ -1.91
RPA3P35244 RPL21P41-201ENST00000459863 264 ntBASIC3.1□□□□□ -1.91
RPA3P35244 RN7SL20P-201ENST00000488827 297 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AL035404.1-201ENST00000497982 568 ntBASIC3.1□□□□□ -1.91
RPA3P35244 RN7SKP283-201ENST00000517197 270 ntBASIC3.1□□□□□ -1.91
RPA3P35244 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.1□□□□□ -1.91
RPA3P35244 MIR5680-201ENST00000577577 84 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.1□□□□□ -1.91
RPA3P35244 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.1□□□□□ -1.91
RPA3P35244 CCDC58P3-201ENST00000590792 430 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AC011468.4-201ENST00000603942 409 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AC024023.1-201ENST00000624530 922 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AC048347.1-201ENST00000624621 427 ntBASIC3.1□□□□□ -1.91
RPA3P35244 U6.98-201ENST00000637157 84 ntBASIC3.1□□□□□ -1.91
RPA3P35244 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.1□□□□□ -1.91
RPA3P35244 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.1□□□□□ -1.91
RPA3P35244 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RPA3P35244 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RPA3P35244 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RPA3P35244 OR1S2-201ENST00000302592 978 ntBASIC3.09□□□□□ -1.91
RPA3P35244 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RPA3P35244 SNORA38.1-201ENST00000364172 131 ntBASIC3.09□□□□□ -1.91
RPA3P35244 DYNLT3P1-201ENST00000378574 347 ntBASIC3.09□□□□□ -1.91
RPA3P35244 AL353678.1-201ENST00000422735 741 ntBASIC3.09□□□□□ -1.91
RPA3P35244 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 MTCO1P43-201ENST00000431831 488 ntBASIC3.09□□□□□ -1.91
RPA3P35244 MTCO1P57-201ENST00000432182 261 ntBASIC3.09□□□□□ -1.91
RPA3P35244 GAPDHP27-201ENST00000447427 1020 ntBASIC3.09□□□□□ -1.91
RPA3P35244 ELOCP23-201ENST00000452014 332 ntBASIC3.09□□□□□ -1.91
RPA3P35244 RN7SL807P-201ENST00000470923 297 ntBASIC3.09□□□□□ -1.91
RPA3P35244 AC104689.1-201ENST00000473356 768 ntBASIC3.09□□□□□ -1.91
RPA3P35244 AC109925.1-201ENST00000478069 331 ntBASIC3.09□□□□□ -1.91
RPA3P35244 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.09□□□□□ -1.91
RPA3P35244 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RPA3P35244 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.09□□□□□ -1.91
RPA3P35244 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
RPA3P35244 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.09□□□□□ -1.91
RPA3P35244 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.09□□□□□ -1.91
RPA3P35244 AL031985.2-201ENST00000600955 480 ntBASIC3.09□□□□□ -1.91
RPA3P35244 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 YWHAQP7-201ENST00000603536 658 ntBASIC3.09□□□□□ -1.91
RPA3P35244 AC015849.2-201ENST00000605738 409 ntBASIC3.09□□□□□ -1.91
RPA3P35244 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 AC242628.1-201ENST00000606810 391 ntBASIC3.09□□□□□ -1.91
RPA3P35244 MIR7112-201ENST00000616126 65 ntBASIC3.09□□□□□ -1.91
RPA3P35244 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.09□□□□□ -1.91
RPA3P35244 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RPA3P35244 AC084035.1-201ENST00000634543 607 ntBASIC3.09□□□□□ -1.91
RPA3P35244 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RPA3P35244 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RPA3P35244 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
RPA3P35244 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RPA3P35244 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
RPA3P35244 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPA3P35244 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.08□□□□□ -1.92
RPA3P35244 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.08□□□□□ -1.92
RPA3P35244 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RPA3P35244 MIR181B1-201ENST00000385240 110 ntBASIC3.08□□□□□ -1.92
RPA3P35244 BTBD10P2-201ENST00000404779 676 ntBASIC3.08□□□□□ -1.92
RPA3P35244 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPA3P35244 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
RPA3P35244 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
RPA3P35244 RNU4-47P-201ENST00000410876 114 ntBASIC3.08□□□□□ -1.92
RPA3P35244 LINC01347-201ENST00000417964 355 ntBASIC3.08□□□□□ -1.92
RPA3P35244 AC023128.2-201ENST00000420880 1223 ntBASIC3.08□□□□□ -1.92
RPA3P35244 OR2B8P-201ENST00000432841 938 ntBASIC3.08□□□□□ -1.92
RPA3P35244 Z75741.1-201ENST00000446793 314 ntBASIC3.08□□□□□ -1.92
RPA3P35244 RN7SL863P-201ENST00000462370 296 ntBASIC3.08□□□□□ -1.92
RPA3P35244 PRDX3P4-201ENST00000470828 747 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms