Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HOXC12P31275 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC12P31275 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HOXC12P31275 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 AL138713.1-201ENST00000624026 2130 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC12P31275 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC12P31275 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 SNORD81.2-201ENST00000365153 76 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HOXC12P31275 RNU6-39P-201ENST00000384344 107 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 RNU6-606P-201ENST00000384721 111 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 RNU6-332P-201ENST00000391193 108 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 AL133270.1-201ENST00000402635 279 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 RIMKLBP2-201ENST00000424737 654 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 RPL35AP12-201ENST00000425362 338 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC12P31275 OR4K11P-201ENST00000431829 904 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 H2AFZP6-201ENST00000444403 394 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 IGHV5-78-201ENST00000450948 295 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 IFNWP4-201ENST00000453148 294 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AL356010.1-201ENST00000456364 102 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC004129.2-201ENST00000457229 287 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC12P31275 AC053481.1-201ENST00000467217 306 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HOXC12P31275 RPS17P15-201ENST00000475609 349 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC12P31275 AL163973.1-201ENST00000484753 577 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 EIF4EP3-201ENST00000498782 656 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 HSPD1P15-201ENST00000505573 1122 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC016559.2-201ENST00000510759 359 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 TOMM22P4-201ENST00000511318 336 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 RN7SKP82-201ENST00000516786 223 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 CDH12P4-201ENST00000517835 295 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 CDH12P3-201ENST00000517935 295 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 CDH12P1-201ENST00000518435 295 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC022790.1-201ENST00000522872 204 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC12P31275 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC12P31275 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC12P31275 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC12P31275 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC12P31275 AC079075.1-201ENST00000559543 878 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC12P31275 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC12P31275 OR4K8P-201ENST00000578842 1048 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 FKBP1AP1-201ENST00000594588 318 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AL512782.1-201ENST00000603093 364 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC024940.4-201ENST00000605507 246 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AL133481.2-203ENST00000607558 139 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC12P31275 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 RNA5SP439-201ENST00000617595 124 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC002550.2-201ENST00000621246 394 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC12P31275 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC12P31275 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
HOXC12P31275 RIOK3P1-201ENST00000418778 1528 ntBASIC5.02□□□□□ -1.61
HOXC12P31275 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC12P31275 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
HOXC12P31275 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC12P31275 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC12P31275 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC12P31275 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC12P31275 AC083899.1-201ENST00000454465 3819 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HOXC12P31275 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC12P31275 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC12P31275 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC12P31275 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC12P31275 AC138907.8-201ENST00000623981 2256 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
HOXC12P31275 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HOXC12P31275 AL645927.1-201ENST00000396783 406 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 AL136116.1-201ENST00000403591 381 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 AL162578.1-201ENST00000406202 378 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 EEF1A1P40-201ENST00000412883 573 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC12P31275 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 CYCSP10-201ENST00000417973 294 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 PDCL2P1-201ENST00000419302 352 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC12P31275 AC008065.1-201ENST00000428525 348 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC12P31275 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC12P31275 RPL21P89-201ENST00000444021 467 ntBASIC5.01□□□□□ -1.61
HOXC12P31275 RPL7P12-201ENST00000446719 750 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms