Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP1P30622 AC116096.1-201ENST00000566804 2314 ntBASIC4.15□□□□□ -1.75
CLIP1P30622 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP1P30622 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 RNU6-984P-201ENST00000363236 109 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 MIR887-201ENST00000401258 79 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 ATF1P1-201ENST00000406040 927 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 RNU2-22P-201ENST00000411266 212 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 AC105402.1-201ENST00000413336 545 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 AC009963.1-201ENST00000417265 157 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 RPL21P112-201ENST00000434403 463 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 RPL23AP15-201ENST00000450202 459 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 BX276092.4-201ENST00000452056 248 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP1P30622 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP1P30622 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP1P30622 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP1P30622 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP1P30622 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP1P30622 AL359757.2-201ENST00000624309 274 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 AC064859.1-201ENST00000624741 174 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP1P30622 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLIP1P30622 AP000526.1-201ENST00000603308 1388 ntBASIC4.14□□□□□ -1.75
CLIP1P30622 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CLIP1P30622 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CLIP1P30622 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.13□□□□□ -1.75
CLIP1P30622 RPLP0P7-201ENST00000416050 667 ntBASIC4.13□□□□□ -1.75
CLIP1P30622 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP1P30622 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.13□□□□□ -1.75
CLIP1P30622 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.13□□□□□ -1.75
CLIP1P30622 RN7SL297P-201ENST00000483161 293 ntBASIC4.13□□□□□ -1.75
CLIP1P30622 TUG1_1.1-201ENST00000610654 145 ntBASIC4.13□□□□□ -1.75
CLIP1P30622 FRG1DP-201ENST00000635586 771 ntBASIC4.13□□□□□ -1.75
CLIP1P30622 AC138915.3-201ENST00000562908 1389 ntBASIC4.13□□□□□ -1.75
CLIP1P30622 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP1P30622 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP1P30622 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLIP1P30622 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP1P30622 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP1P30622 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.12□□□□□ -1.75
CLIP1P30622 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.12□□□□□ -1.75
CLIP1P30622 AC013470.3-201ENST00000420252 1194 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.12□□□□□ -1.75
CLIP1P30622 SNRPGP5-201ENST00000456003 220 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 HMGB1P25-201ENST00000468402 607 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 AC103975.1-201ENST00000482506 483 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 RN7SL283P-201ENST00000489055 303 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 YWHAEP4-201ENST00000505390 198 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CLIP1P30622 USP9YP5-201ENST00000511770 630 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 AC008413.1-201ENST00000511864 177 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 AP002770.2-201ENST00000543613 532 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 MIR3186-201ENST00000577404 85 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP1P30622 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP1P30622 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP1P30622 AC004825.2-201ENST00000616634 455 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.12□□□□□ -1.75
CLIP1P30622 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP1P30622 AC134882.1-201ENST00000603738 1676 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 ZNF826P-207ENST00000622273 1910 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP1P30622 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.12□□□□□ -1.75
CLIP1P30622 NPM1P11-201ENST00000417106 855 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 PTP4A1P5-201ENST00000420305 455 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 OR2B8P-201ENST00000432841 938 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP1P30622 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.12□□□□□ -1.75
CLIP1P30622 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLIP1P30622 OR4A45P-201ENST00000529954 901 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.12□□□□□ -1.75
CLIP1P30622 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.12□□□□□ -1.75
CLIP1P30622 AC104763.2-201ENST00000604179 382 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 AC107294.3-201ENST00000609211 526 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.12□□□□□ -1.75
CLIP1P30622 CTSLP2-204ENST00000629029 392 ntBASIC4.12□□□□□ -1.75
CLIP1P30622 OR10AB1P-202ENST00000641219 1686 ntBASIC4.11□□□□□ -1.75
CLIP1P30622 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLIP1P30622 RNA5SP129-201ENST00000410276 118 ntBASIC4.11□□□□□ -1.75
CLIP1P30622 AC011816.1-201ENST00000441346 546 ntBASIC4.11□□□□□ -1.75
CLIP1P30622 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.11□□□□□ -1.75
CLIP1P30622 UBTFL10-201ENST00000528532 562 ntBASIC4.11□□□□□ -1.75
CLIP1P30622 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
CLIP1P30622 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.11□□□□□ -1.75
CLIP1P30622 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLIP1P30622 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.11□□□□□ -1.75
CLIP1P30622 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
CLIP1P30622 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLIP1P30622 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLIP1P30622 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.1□□□□□ -1.75
CLIP1P30622 MTND5P27-201ENST00000428871 1720 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLIP1P30622 GSTA12P-201ENST00000402398 508 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 AL049610.1-201ENST00000423374 372 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 BTG3P1-201ENST00000435859 716 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.1□□□□□ -1.75
CLIP1P30622 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.1□□□□□ -1.75
CLIP1P30622 RPL21P18-201ENST00000469899 480 ntBASIC4.1□□□□□ -1.75
CLIP1P30622 RPL23AP44-201ENST00000482216 473 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms