Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AP002812.4-201ENST00000532139 286 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA1P17096 AL355836.1-201ENST00000555951 870 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 AC122134.1-201ENST00000565664 1104 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 MIR3186-201ENST00000577404 85 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGA1P17096 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGA1P17096 AC010149.2-201ENST00000637608 315 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGA1P17096 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA1P17096 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA1P17096 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA1P17096 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA1P17096 EXOC5P1-201ENST00000510543 1969 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HMGA1P17096 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGA1P17096 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
HMGA1P17096 AC092111.2-201ENST00000611627 1414 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AC011155.1-201ENST00000316512 456 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 MIR27B-201ENST00000385129 97 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGA1P17096 RPL7P36-201ENST00000444633 681 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AL645939.1-201ENST00000453429 797 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AC093663.2-201ENST00000484625 313 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AC092185.1-201ENST00000491371 97 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGA1P17096 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGA1P17096 RPL7P20-201ENST00000520308 745 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AC100870.1-201ENST00000522035 505 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HMGA1P17096 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGA1P17096 MIR3945-201ENST00000581853 98 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AC107294.1-201ENST00000609524 467 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AC013412.1-201ENST00000610687 192 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGA1P17096 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGA1P17096 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HMGA1P17096 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGA1P17096 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGA1P17096 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HMGA1P17096 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.7□□□□□ -1.98
HMGA1P17096 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
HMGA1P17096 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGA1P17096 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
HMGA1P17096 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HMGA1P17096 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGA1P17096 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.69□□□□□ -1.98
HMGA1P17096 OR13C3-201ENST00000374781 1108 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 MIR518C-201ENST00000384822 101 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 USP9YP20-201ENST00000419224 558 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGA1P17096 RPL7P53-201ENST00000421245 739 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 AL356806.1-201ENST00000422524 916 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 AL035407.1-201ENST00000429211 571 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 EEF1B2P7-201ENST00000451177 676 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 SNRPGP5-201ENST00000456003 220 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 RPL23AP11-201ENST00000475260 469 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 HSPE1P6-201ENST00000479457 291 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 AC104687.1-201ENST00000485829 412 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 SRIP1-201ENST00000489235 288 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.69□□□□□ -1.98
HMGA1P17096 AP001207.1-201ENST00000524051 481 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 AP001646.1-201ENST00000527936 915 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGA1P17096 AL391156.1-201ENST00000554965 554 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGA1P17096 AC099778.2-201ENST00000610904 211 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGA1P17096 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGA1P17096 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HMGA1P17096 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGA1P17096 AC066616.2-201ENST00000559334 1481 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGA1P17096 AC046144.1-201ENST00000478559 1853 ntBASIC2.69□□□□□ -1.98
HMGA1P17096 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HMGA1P17096 SNORA62.2-201ENST00000364672 152 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 AC069218.2-201ENST00000411665 344 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 BMS1P22-201ENST00000414726 313 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGA1P17096 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGA1P17096 AL590639.1-201ENST00000456484 337 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 HMGB1P25-201ENST00000468402 607 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 AP003122.3-201ENST00000526316 255 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 AC091544.4-201ENST00000555268 342 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 AC068446.3-201ENST00000555285 382 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGA1P17096 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGA1P17096 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.68□□□□□ -1.98
HMGA1P17096 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGA1P17096 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGA1P17096 AC138393.1-206ENST00000540997 1886 ntBASIC2.68□□□□□ -1.98
HMGA1P17096 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HMGA1P17096 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HMGA1P17096 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGA1P17096 XIAPP3-201ENST00000312918 795 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 NDUFB4P5-201ENST00000415445 361 ntBASIC2.67□□□□□ -1.98
HMGA1P17096 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms