Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 AL136360.1-201ENST00000503377 1900 ntBASIC7.59□□□□□ -1.19
CD44P16070 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CD44P16070 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CD44P16070 Y_RNA.570-201ENST00000384750 101 ntBASIC7.59□□□□□ -1.19
CD44P16070 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC7.59□□□□□ -1.19
CD44P16070 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.59□□□□□ -1.19
CD44P16070 ATP5LP4-201ENST00000434169 307 ntBASIC7.59□□□□□ -1.19
CD44P16070 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC7.59□□□□□ -1.19
CD44P16070 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.59□□□□□ -1.19
CD44P16070 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.59□□□□□ -1.19
CD44P16070 RBMY2TP-201ENST00000451162 947 ntBASIC7.59□□□□□ -1.19
CD44P16070 AC092991.1-201ENST00000477176 376 ntBASIC7.59□□□□□ -1.19
CD44P16070 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.59□□□□□ -1.19
CD44P16070 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.59□□□□□ -1.19
CD44P16070 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC7.59□□□□□ -1.19
CD44P16070 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.59□□□□□ -1.19
CD44P16070 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 AC024153.1-201ENST00000603103 365 ntBASIC7.59□□□□□ -1.19
CD44P16070 AL513218.1-201ENST00000606527 391 ntBASIC7.59□□□□□ -1.19
CD44P16070 AC068234.2-201ENST00000619646 522 ntBASIC7.59□□□□□ -1.19
CD44P16070 AC110801.1-201ENST00000623590 212 ntBASIC7.59□□□□□ -1.19
CD44P16070 FKBP1AP4-201ENST00000631775 336 ntBASIC7.59□□□□□ -1.19
CD44P16070 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
CD44P16070 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.59□□□□□ -1.19
CD44P16070 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.59□□□□□ -1.19
CD44P16070 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.59□□□□□ -1.19
CD44P16070 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CD44P16070 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CD44P16070 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CD44P16070 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC7.59□□□□□ -1.2
CD44P16070 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC7.58□□□□□ -1.2
CD44P16070 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CD44P16070 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 RN7SKP78-201ENST00000364711 318 ntBASIC7.58□□□□□ -1.2
CD44P16070 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CD44P16070 RNU6-968P-201ENST00000384076 107 ntBASIC7.58□□□□□ -1.2
CD44P16070 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC7.58□□□□□ -1.2
CD44P16070 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.58□□□□□ -1.2
CD44P16070 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 AC104073.1-201ENST00000451988 151 ntBASIC7.58□□□□□ -1.2
CD44P16070 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC7.58□□□□□ -1.2
CD44P16070 TUBBP11-201ENST00000472255 252 ntBASIC7.58□□□□□ -1.2
CD44P16070 RPL36AP41-201ENST00000493820 306 ntBASIC7.58□□□□□ -1.2
CD44P16070 AC063943.2-201ENST00000495697 534 ntBASIC7.58□□□□□ -1.2
CD44P16070 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.58□□□□□ -1.2
CD44P16070 MRPL49P1-201ENST00000505951 535 ntBASIC7.58□□□□□ -1.2
CD44P16070 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.58□□□□□ -1.2
CD44P16070 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.58□□□□□ -1.2
CD44P16070 RNU6-677P-201ENST00000516914 101 ntBASIC7.58□□□□□ -1.2
CD44P16070 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC7.58□□□□□ -1.2
CD44P16070 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC7.58□□□□□ -1.2
CD44P16070 AC090877.1-201ENST00000561418 344 ntBASIC7.58□□□□□ -1.2
CD44P16070 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC7.58□□□□□ -1.2
CD44P16070 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.58□□□□□ -1.2
CD44P16070 OR7E18P-201ENST00000592589 702 ntBASIC7.58□□□□□ -1.2
CD44P16070 CYCSP1-201ENST00000604815 315 ntBASIC7.58□□□□□ -1.2
CD44P16070 RPL23AP88-201ENST00000605759 454 ntBASIC7.58□□□□□ -1.2
CD44P16070 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.58□□□□□ -1.2
CD44P16070 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.58□□□□□ -1.2
CD44P16070 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.58□□□□□ -1.2
CD44P16070 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CD44P16070 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.57□□□□□ -1.2
CD44P16070 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
CD44P16070 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.57□□□□□ -1.2
CD44P16070 AC018555.1-201ENST00000567548 1980 ntBASIC7.57□□□□□ -1.2
CD44P16070 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.57□□□□□ -1.2
CD44P16070 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
CD44P16070 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 Y_RNA.209-201ENST00000364156 111 ntBASIC7.57□□□□□ -1.2
CD44P16070 SNORA25.7-201ENST00000364375 127 ntBASIC7.57□□□□□ -1.2
CD44P16070 Y_RNA.337-201ENST00000365312 102 ntBASIC7.57□□□□□ -1.2
CD44P16070 SNORD37.2-201ENST00000391075 66 ntBASIC7.57□□□□□ -1.2
CD44P16070 RNU6-607P-201ENST00000411283 108 ntBASIC7.57□□□□□ -1.2
CD44P16070 TBCAP2-201ENST00000416175 326 ntBASIC7.57□□□□□ -1.2
CD44P16070 AC117440.1-201ENST00000474107 571 ntBASIC7.57□□□□□ -1.2
CD44P16070 SNORD33.1-201ENST00000516213 88 ntBASIC7.57□□□□□ -1.2
CD44P16070 CARD18-203ENST00000532895 422 ntTSL 2 BASIC7.57□□□□□ -1.2
CD44P16070 AC024940.3-201ENST00000538551 316 ntBASIC7.57□□□□□ -1.2
CD44P16070 AC022968.1-201ENST00000567372 442 ntBASIC7.57□□□□□ -1.2
CD44P16070 VN1R84P-201ENST00000593697 235 ntBASIC7.57□□□□□ -1.2
CD44P16070 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms