Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC063979.1-201ENST00000415539 377 ntBASIC3.85□□□□□ -1.79
TOP1P11387 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP1P11387 AC012065.2-201ENST00000421295 375 ntBASIC3.85□□□□□ -1.79
TOP1P11387 FAM204CP-201ENST00000424489 642 ntBASIC3.85□□□□□ -1.79
TOP1P11387 MTCO1P43-201ENST00000431831 488 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.85□□□□□ -1.79
TOP1P11387 AC091862.1-201ENST00000438016 1100 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AL662791.1-201ENST00000441992 928 ntBASIC3.85□□□□□ -1.79
TOP1P11387 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.85□□□□□ -1.79
TOP1P11387 TPRKBP1-201ENST00000456243 481 ntBASIC3.85□□□□□ -1.79
TOP1P11387 HMGB1P38-201ENST00000490557 577 ntBASIC3.85□□□□□ -1.79
TOP1P11387 OR9N1P-202ENST00000494289 481 ntBASIC3.85□□□□□ -1.79
TOP1P11387 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.85□□□□□ -1.79
TOP1P11387 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP1P11387 AC016065.2-201ENST00000514530 444 ntBASIC3.85□□□□□ -1.79
TOP1P11387 RN7SKP244-201ENST00000516513 307 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP1P11387 MTCYBP41-201ENST00000528913 1123 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AC004024.1-201ENST00000549244 247 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP1P11387 AL389895.1-201ENST00000554127 252 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP1P11387 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.85□□□□□ -1.79
TOP1P11387 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.85□□□□□ -1.79
TOP1P11387 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP1P11387 MIR5680-201ENST00000577577 84 ntBASIC3.85□□□□□ -1.79
TOP1P11387 ZNF415P1-201ENST00000582279 1166 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AC005242.1-201ENST00000585658 438 ntBASIC3.85□□□□□ -1.79
TOP1P11387 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.85□□□□□ -1.79
TOP1P11387 AC012467.1-201ENST00000607740 256 ntBASIC3.85□□□□□ -1.79
TOP1P11387 U6.107-201ENST00000637108 79 ntBASIC3.85□□□□□ -1.79
TOP1P11387 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP1P11387 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TOP1P11387 AC007496.3-201ENST00000624987 3443 ntBASIC3.85□□□□□ -1.79
TOP1P11387 MTND5P28-201ENST00000438005 1594 ntBASIC3.85□□□□□ -1.79
TOP1P11387 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TOP1P11387 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOP1P11387 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOP1P11387 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOP1P11387 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOP1P11387 RAD1P1-201ENST00000231383 813 ntBASIC3.84□□□□□ -1.79
TOP1P11387 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.84□□□□□ -1.79
TOP1P11387 RNA5SP295-201ENST00000362655 121 ntBASIC3.84□□□□□ -1.79
TOP1P11387 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP1P11387 USP9YP19-201ENST00000412165 485 ntBASIC3.84□□□□□ -1.79
TOP1P11387 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP1P11387 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP1P11387 AL500527.1-201ENST00000448532 255 ntBASIC3.84□□□□□ -1.79
TOP1P11387 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP1P11387 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.84□□□□□ -1.79
TOP1P11387 HMGN1P18-201ENST00000457642 277 ntBASIC3.84□□□□□ -1.79
TOP1P11387 RPL21P104-201ENST00000464143 478 ntBASIC3.84□□□□□ -1.79
TOP1P11387 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP1P11387 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP1P11387 HMGB3P15-201ENST00000507326 574 ntBASIC3.84□□□□□ -1.79
TOP1P11387 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP1P11387 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP1P11387 SNORA70.24-201ENST00000517233 118 ntBASIC3.84□□□□□ -1.79
TOP1P11387 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.84□□□□□ -1.79
TOP1P11387 C1DP5-201ENST00000525775 383 ntBASIC3.84□□□□□ -1.79
TOP1P11387 OR5AK3P-201ENST00000527486 1297 ntBASIC3.84□□□□□ -1.79
TOP1P11387 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP1P11387 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP1P11387 AC139103.1-201ENST00000534696 1030 ntBASIC3.84□□□□□ -1.79
TOP1P11387 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TOP1P11387 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TOP1P11387 SNRPGP1-201ENST00000553864 222 ntBASIC3.84□□□□□ -1.79
TOP1P11387 AL442163.2-201ENST00000553912 710 ntBASIC3.84□□□□□ -1.79
TOP1P11387 AC012414.2-201ENST00000559474 187 ntBASIC3.84□□□□□ -1.79
TOP1P11387 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.84□□□□□ -1.79
TOP1P11387 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP1P11387 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.84□□□□□ -1.79
TOP1P11387 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.84□□□□□ -1.79
TOP1P11387 AC007566.2-201ENST00000603642 413 ntBASIC3.84□□□□□ -1.79
TOP1P11387 IGHV3-29-201ENST00000604817 344 ntBASIC3.84□□□□□ -1.79
TOP1P11387 uc_338.1-201ENST00000612113 180 ntBASIC3.84□□□□□ -1.79
TOP1P11387 ZNF90P1-201ENST00000480493 1951 ntBASIC3.83□□□□□ -1.8
TOP1P11387 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP1P11387 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TOP1P11387 SNORA38.1-201ENST00000364172 131 ntBASIC3.83□□□□□ -1.8
TOP1P11387 AL138880.1-201ENST00000405824 642 ntBASIC3.83□□□□□ -1.8
TOP1P11387 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TOP1P11387 AC019070.1-201ENST00000415008 1024 ntBASIC3.83□□□□□ -1.8
TOP1P11387 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.83□□□□□ -1.8
TOP1P11387 ARF4P2-201ENST00000430209 526 ntBASIC3.83□□□□□ -1.8
TOP1P11387 VDAC1P3-201ENST00000434069 851 ntBASIC3.83□□□□□ -1.8
TOP1P11387 AC006028.1-201ENST00000438379 402 ntBASIC3.83□□□□□ -1.8
TOP1P11387 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.83□□□□□ -1.8
TOP1P11387 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP1P11387 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP1P11387 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.83□□□□□ -1.8
TOP1P11387 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.83□□□□□ -1.8
TOP1P11387 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TOP1P11387 AP000893.1-201ENST00000474462 794 ntBASIC3.83□□□□□ -1.8
TOP1P11387 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP1P11387 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.83□□□□□ -1.8
TOP1P11387 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP1P11387 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP1P11387 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.83□□□□□ -1.8
TOP1P11387 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms