Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SNORA64.4-201ENST00000516632 81 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.06□□□□□ -1.92
UBCP0CG48 MTCO1P49-201ENST00000523429 802 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.06□□□□□ -1.92
UBCP0CG48 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBCP0CG48 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.06□□□□□ -1.92
UBCP0CG48 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBCP0CG48 OR8R1P-201ENST00000543943 764 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.06□□□□□ -1.92
UBCP0CG48 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.06□□□□□ -1.92
UBCP0CG48 AC012467.1-201ENST00000607740 256 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 AC239803.2-201ENST00000610161 430 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
UBCP0CG48 AC092650.2-201ENST00000619984 902 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 AC110774.1-201ENST00000623567 2018 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 AC007496.3-201ENST00000624987 3443 ntBASIC3.06□□□□□ -1.92
UBCP0CG48 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.06□□□□□ -1.92
UBCP0CG48 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBCP0CG48 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBCP0CG48 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.05□□□□□ -1.92
UBCP0CG48 AL645568.2-201ENST00000432815 1337 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBCP0CG48 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBCP0CG48 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBCP0CG48 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.05□□□□□ -1.92
UBCP0CG48 HMGB3P23-201ENST00000414981 585 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC093578.1-201ENST00000415219 368 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.05□□□□□ -1.92
UBCP0CG48 RPS7P15-201ENST00000415804 584 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 FNDC3CP-201ENST00000420795 1155 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 RSL24D1P8-201ENST00000434442 492 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.05□□□□□ -1.92
UBCP0CG48 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.05□□□□□ -1.92
UBCP0CG48 AC104073.1-201ENST00000451988 151 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC104308.1-201ENST00000454621 333 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC007967.1-201ENST00000455422 1159 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBCP0CG48 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
UBCP0CG48 KCTD9P5-201ENST00000504141 1170 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 RNU6-416P-201ENST00000516265 103 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.05□□□□□ -1.92
UBCP0CG48 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.05□□□□□ -1.92
UBCP0CG48 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.05□□□□□ -1.92
UBCP0CG48 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.05□□□□□ -1.92
UBCP0CG48 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.05□□□□□ -1.92
UBCP0CG48 RN7SL703P-201ENST00000578485 302 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.05□□□□□ -1.92
UBCP0CG48 XIAPP1-201ENST00000603162 600 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AL590392.1-201ENST00000604960 446 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC128687.1-201ENST00000605304 619 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC005972.3-201ENST00000606304 481 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC020658.4-201ENST00000613987 684 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AL110115.1-201ENST00000614396 364 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AC018755.4-201ENST00000619715 454 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 AL357559.1-201ENST00000622228 274 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 RNA5SP196-201ENST00000625967 102 ntBASIC3.05□□□□□ -1.92
UBCP0CG48 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
UBCP0CG48 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBCP0CG48 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBCP0CG48 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 SRP72P2-201ENST00000344851 1979 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.04□□□□□ -1.92
UBCP0CG48 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBCP0CG48 RNU6-1249P-201ENST00000363237 111 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 SNORA56-201ENST00000383966 129 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 AL591034.1-201ENST00000407447 340 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
UBCP0CG48 ATP5A1P2-201ENST00000412323 255 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.04□□□□□ -1.92
UBCP0CG48 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 AC005002.1-201ENST00000447458 540 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 TPT1P12-201ENST00000448968 492 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.04□□□□□ -1.92
UBCP0CG48 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 AC010301.1-201ENST00000473936 355 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 RPL21P47-201ENST00000483696 477 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 MTND4LP22-201ENST00000508209 276 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 AC010468.3-201ENST00000508225 458 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 HMGN1P11-201ENST00000508668 303 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.04□□□□□ -1.92
UBCP0CG48 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.04□□□□□ -1.92
UBCP0CG48 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.04□□□□□ -1.92
UBCP0CG48 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.04□□□□□ -1.92
UBCP0CG48 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.04□□□□□ -1.92
UBCP0CG48 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.04□□□□□ -1.92
UBCP0CG48 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 AC087481.2-201ENST00000565492 330 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 AC023824.3-201ENST00000569003 562 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 MIR5685-201ENST00000579080 79 ntBASIC3.04□□□□□ -1.92
UBCP0CG48 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.04□□□□□ -1.92
UBCP0CG48 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms