Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MTCO1P21-201ENST00000416634 589 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC073136.2-201ENST00000417282 849 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 PAICSP7-201ENST00000419829 962 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AL590609.2-201ENST00000421430 368 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC6P09630 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC6P09630 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC6P09630 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC6P09630 YWHAZP7-201ENST00000436906 631 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 CACYBPP1-201ENST00000438592 684 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC002542.1-201ENST00000440683 193 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC6P09630 AP000936.2-201ENST00000447151 681 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC6P09630 AC079776.3-201ENST00000450665 370 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC097262.1-201ENST00000452559 548 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 UBDP1-202ENST00000457888 382 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC021205.1-201ENST00000468797 348 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC6P09630 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC6P09630 HMGB3P13-201ENST00000511263 607 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC010625.1-201ENST00000511296 403 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC6P09630 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC6P09630 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HOXC6P09630 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC6P09630 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC6P09630 AC012213.3-201ENST00000577199 777 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 MIR548Y-201ENST00000582739 110 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 MIR5195-201ENST00000583555 115 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AL160281.1-201ENST00000605307 311 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC090525.3-201ENST00000605601 189 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC073114.1-201ENST00000612027 490 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC6P09630 AC131238.1-201ENST00000617135 328 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC022509.4-201ENST00000621404 572 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AF246928.1-201ENST00000623768 87 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC6P09630 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC6P09630 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
HOXC6P09630 MTND4P31-201ENST00000425607 1343 ntBASIC4.37□□□□□ -1.71
HOXC6P09630 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC6P09630 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC6P09630 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC6P09630 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC6P09630 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC6P09630 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC6P09630 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC6P09630 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC6P09630 CR381670.1-201ENST00000624291 1693 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC6P09630 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC6P09630 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC6P09630 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HOXC6P09630 RNU5A-2P-201ENST00000384337 116 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 RNU6-178P-201ENST00000384631 104 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 RPS3AP26-201ENST00000398259 784 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AC092745.2-202ENST00000411880 369 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 ATP5A1P2-201ENST00000412323 255 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC6P09630 RPS7P15-201ENST00000415804 584 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AC245052.5-201ENST00000416320 649 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC6P09630 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 AC098826.1-201ENST00000433943 471 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 RPL7P29-201ENST00000437151 728 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 MTCYBP34-201ENST00000439552 670 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AL591503.2-201ENST00000442314 1005 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AL606662.1-201ENST00000445763 553 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HOXC6P09630 AC022431.1-201ENST00000450941 438 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 RPL21P134-201ENST00000453468 483 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 RN7SL809P-201ENST00000482040 297 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC6P09630 RNU6-416P-201ENST00000516265 103 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC6P09630 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC6P09630 OR4A12P-201ENST00000530847 918 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXC6P09630 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC6P09630 PDCD5P1-201ENST00000543528 309 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC6P09630 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC6P09630 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC6P09630 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC6P09630 ZNF415P1-201ENST00000582279 1166 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC6P09630 AC004987.4-201ENST00000603383 338 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 AL607023.1-201ENST00000620045 248 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 MIR4278-201ENST00000636094 69 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms