Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RPL7P43-201ENST00000478876 753 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 RN7SL432P-201ENST00000484057 298 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC124945.1-201ENST00000485133 188 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFAP04085 RN7SKP277-201ENST00000516895 283 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC100870.1-201ENST00000522035 505 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFAP04085 RANP3-201ENST00000530970 276 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.65□□□□□ -1.5
PDGFAP04085 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFAP04085 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.65□□□□□ -1.5
PDGFAP04085 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFAP04085 AC138761.3-201ENST00000579993 334 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 MIR3672-201ENST00000584290 82 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC023043.2-201ENST00000589678 1026 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 OR7E18P-201ENST00000592589 702 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AL022394.1-201ENST00000606979 292 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AL157817.1-201ENST00000614264 790 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.65□□□□□ -1.5
PDGFAP04085 RMST_9.1-201ENST00000619945 193 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC000095.2-202ENST00000637415 154 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 AC103710.2-202ENST00000641454 2853 ntBASIC5.65□□□□□ -1.5
PDGFAP04085 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.65□□□□□ -1.51
PDGFAP04085 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDGFAP04085 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDGFAP04085 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.51
PDGFAP04085 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDGFAP04085 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.65□□□□□ -1.51
PDGFAP04085 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.51
PDGFAP04085 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PDGFAP04085 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFAP04085 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 AC022164.1-201ENST00000568767 2673 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 XIAPP3-201ENST00000312918 795 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDGFAP04085 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 Y_RNA.112-201ENST00000363250 102 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 RNU6-196P-201ENST00000384315 107 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 RNU6-1105P-201ENST00000384774 107 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 MT-TC-201ENST00000387405 66 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 RPL23AP17-201ENST00000401064 499 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 RNU2-47P-201ENST00000410649 186 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 RPL30P2-201ENST00000414021 291 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC113618.1-201ENST00000416747 285 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 RPL7P10-201ENST00000417407 739 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFAP04085 AL354766.1-201ENST00000423396 542 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL358176.2-201ENST00000425769 204 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 VTI1BP4-201ENST00000427516 527 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFAP04085 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDGFAP04085 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFAP04085 RPL23AP60-201ENST00000450011 454 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFAP04085 MRPS31P2-201ENST00000451581 518 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFAP04085 AC114728.1-201ENST00000488289 483 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFAP04085 HIGD1AP13-201ENST00000509878 289 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC010343.2-201ENST00000510162 224 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFAP04085 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 AC135001.1-201ENST00000544546 283 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 GSTP1P1-201ENST00000548078 319 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC093012.1-202ENST00000549403 582 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.64□□□□□ -1.51
PDGFAP04085 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.64□□□□□ -1.51
PDGFAP04085 AC106782.4-201ENST00000568264 210 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDGFAP04085 AC069061.3-201ENST00000582254 823 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 AL670379.6-201ENST00000603753 252 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL670379.11-201ENST00000604059 253 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL031176.1-201ENST00000604554 466 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC008162.1-201ENST00000604718 254 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL670379.1-201ENST00000604752 252 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL670379.5-201ENST00000605253 252 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL670379.12-201ENST00000605291 253 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL670379.8-201ENST00000605353 252 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC097467.4-201ENST00000605504 141 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AL670379.7-201ENST00000605823 252 ntBASIC5.64□□□□□ -1.51
PDGFAP04085 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.64□□□□□ -1.51
PDGFAP04085 AC103705.1-201ENST00000619013 241 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms