Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VTNP04004 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VTNP04004 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VTNP04004 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 MIR513B-201ENST00000385136 84 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 RNU6-272P-201ENST00000411028 104 ntBASIC3.88□□□□□ -1.79
VTNP04004 RN7SKP53-201ENST00000411337 315 ntBASIC3.88□□□□□ -1.79
VTNP04004 BX323014.1-201ENST00000412876 237 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 KRR1P1-201ENST00000419430 803 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC027644.1-201ENST00000419595 298 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL513175.2-201ENST00000422071 443 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.88□□□□□ -1.79
VTNP04004 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.88□□□□□ -1.79
VTNP04004 RPS26P40-201ENST00000435209 294 ntBASIC3.88□□□□□ -1.79
VTNP04004 CR769776.1-201ENST00000441254 787 ntBASIC3.88□□□□□ -1.79
VTNP04004 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 PTENP1-201ENST00000447117 1215 ntBASIC3.88□□□□□ -1.79
VTNP04004 MRPL42P4-201ENST00000453267 443 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 BX510359.1-201ENST00000456973 237 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 HMGB1P21-201ENST00000502313 581 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 OR5H4P-201ENST00000510851 923 ntBASIC3.88□□□□□ -1.79
VTNP04004 VWA8P1-201ENST00000510889 176 ntBASIC3.88□□□□□ -1.79
VTNP04004 RPL7L1P13-201ENST00000511702 739 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.88□□□□□ -1.79
VTNP04004 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 AC092747.2-201ENST00000545069 983 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.88□□□□□ -1.79
VTNP04004 NCAPGP2-201ENST00000557911 754 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.88□□□□□ -1.79
VTNP04004 KLKP1-201ENST00000595979 403 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL031985.2-201ENST00000600955 480 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL020997.3-201ENST00000602843 359 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.88□□□□□ -1.79
VTNP04004 AP005137.2-201ENST00000609238 400 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL138478.1-201ENST00000612252 832 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC024257.5-201ENST00000612739 531 ntBASIC3.88□□□□□ -1.79
VTNP04004 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 AL442067.2-201ENST00000614033 363 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL121895.2-201ENST00000619558 447 ntBASIC3.88□□□□□ -1.79
VTNP04004 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC091953.5-201ENST00000622919 233 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC090897.3-201ENST00000636973 1157 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC087821.2-201ENST00000637086 450 ntBASIC3.88□□□□□ -1.79
VTNP04004 LINC02211-204ENST00000642024 1070 ntBASIC3.88□□□□□ -1.79
VTNP04004 AL732372.2-225ENST00000642124 456 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.88□□□□□ -1.79
VTNP04004 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 AC073346.2-201ENST00000624724 2058 ntBASIC3.88□□□□□ -1.79
VTNP04004 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.88□□□□□ -1.79
VTNP04004 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTNP04004 AC025263.3-201ENST00000622965 1396 ntBASIC3.88□□□□□ -1.79
VTNP04004 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VTNP04004 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTNP04004 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VTNP04004 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
VTNP04004 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VTNP04004 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTNP04004 AC073073.2-201ENST00000609827 2578 ntBASIC3.87□□□□□ -1.79
VTNP04004 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
VTNP04004 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.87□□□□□ -1.79
VTNP04004 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VTNP04004 AL512646.1-201ENST00000269395 1077 ntBASIC3.87□□□□□ -1.79
VTNP04004 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
VTNP04004 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VTNP04004 SNORA51.12-201ENST00000384448 134 ntBASIC3.87□□□□□ -1.79
VTNP04004 MIR491-201ENST00000384877 84 ntBASIC3.87□□□□□ -1.79
VTNP04004 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTNP04004 MTCO2P31-201ENST00000402702 684 ntBASIC3.87□□□□□ -1.79
VTNP04004 AL079342.2-201ENST00000403367 482 ntBASIC3.87□□□□□ -1.79
VTNP04004 PRELID3BP11-201ENST00000414230 479 ntBASIC3.87□□□□□ -1.79
VTNP04004 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.87□□□□□ -1.79
VTNP04004 AL158156.1-201ENST00000422509 473 ntBASIC3.87□□□□□ -1.79
VTNP04004 XKRYP1-201ENST00000423438 492 ntBASIC3.87□□□□□ -1.79
VTNP04004 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.87□□□□□ -1.79
VTNP04004 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.87□□□□□ -1.79
VTNP04004 XKRYP2-201ENST00000432915 492 ntBASIC3.87□□□□□ -1.79
VTNP04004 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.87□□□□□ -1.79
VTNP04004 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.87□□□□□ -1.79
VTNP04004 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.87□□□□□ -1.79
VTNP04004 AC015724.1-201ENST00000478577 156 ntBASIC3.87□□□□□ -1.79
VTNP04004 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms