Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MIR592-201ENST00000384959 97 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL4A1P02462 BTF3P7-201ENST00000407097 488 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 RNA5SP508-201ENST00000411327 119 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 SMC4P1-201ENST00000414479 527 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 ZYG11AP1-201ENST00000430329 837 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A1P02462 RNU6-237P-201ENST00000515985 71 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 SNORA31.1-201ENST00000515993 133 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 SNORA31.5-201ENST00000516190 133 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A1P02462 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.09□□□□□ -1.91
COL4A1P02462 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.09□□□□□ -1.91
COL4A1P02462 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.09□□□□□ -1.91
COL4A1P02462 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.09□□□□□ -1.91
COL4A1P02462 AP006248.2-201ENST00000623309 592 ntBASIC3.09□□□□□ -1.91
COL4A1P02462 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL4A1P02462 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
COL4A1P02462 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.09□□□□□ -1.92
COL4A1P02462 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
COL4A1P02462 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.09□□□□□ -1.92
COL4A1P02462 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A1P02462 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL4A1P02462 AL359511.1-201ENST00000402970 211 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.08□□□□□ -1.92
COL4A1P02462 AC103975.1-201ENST00000482506 483 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 RN7SL297P-201ENST00000483161 293 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.08□□□□□ -1.92
COL4A1P02462 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.08□□□□□ -1.92
COL4A1P02462 AL392112.1-201ENST00000605115 829 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AL356274.1-201ENST00000617064 410 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AC131238.1-201ENST00000617135 328 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 CRYM-AS1-204ENST00000637983 556 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.08□□□□□ -1.92
COL4A1P02462 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
COL4A1P02462 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
COL4A1P02462 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
COL4A1P02462 RNA5SP502-201ENST00000362694 119 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 OR6K1P-201ENST00000456766 971 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AP002884.2-201ENST00000471647 395 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AC234781.5-201ENST00000508429 271 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.08□□□□□ -1.92
COL4A1P02462 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.08□□□□□ -1.92
COL4A1P02462 AC008126.1-201ENST00000549019 480 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 VN1R78P-201ENST00000597393 564 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AC025034.2-201ENST00000623264 286 ntBASIC3.08□□□□□ -1.92
COL4A1P02462 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL4A1P02462 MIR708-201ENST00000390708 88 ntBASIC3.07□□□□□ -1.92
COL4A1P02462 SEPT7P2-202ENST00000398921 823 ntBASIC3.07□□□□□ -1.92
COL4A1P02462 Z98742.3-201ENST00000418637 326 ntBASIC3.07□□□□□ -1.92
COL4A1P02462 USP9YP20-201ENST00000419224 558 ntBASIC3.07□□□□□ -1.92
COL4A1P02462 TOMM20P4-201ENST00000427861 435 ntBASIC3.07□□□□□ -1.92
COL4A1P02462 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.07□□□□□ -1.92
COL4A1P02462 KCTD9P5-201ENST00000504141 1170 ntBASIC3.07□□□□□ -1.92
COL4A1P02462 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.07□□□□□ -1.92
COL4A1P02462 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.07□□□□□ -1.92
COL4A1P02462 ATP5F1P7-201ENST00000567330 760 ntBASIC3.07□□□□□ -1.92
COL4A1P02462 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.07□□□□□ -1.92
COL4A1P02462 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.07□□□□□ -1.92
COL4A1P02462 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.06□□□□□ -1.92
COL4A1P02462 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
COL4A1P02462 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
COL4A1P02462 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL4A1P02462 AL512633.1-201ENST00000399931 655 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A1P02462 AC245517.2-201ENST00000442890 346 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 AL592437.1-201ENST00000443781 492 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 snoU13.15-201ENST00000459407 104 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 RPL23AP14-201ENST00000468281 468 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 RPL36AP51-201ENST00000487216 318 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 RN7SL636P-201ENST00000497504 294 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A1P02462 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.06□□□□□ -1.92
COL4A1P02462 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.06□□□□□ -1.92
COL4A1P02462 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.06□□□□□ -1.92
COL4A1P02462 AC022069.1-201ENST00000582910 658 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 AC012119.1-201ENST00000603184 222 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.06□□□□□ -1.92
COL4A1P02462 AC016542.2-201ENST00000624201 619 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 AC241585.2-209ENST00000638217 143 ntBASIC3.06□□□□□ -1.92
COL4A1P02462 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.06□□□□□ -1.92
COL4A1P02462 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL4A1P02462 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL4A1P02462 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
COL4A1P02462 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A1P02462 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A1P02462 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
COL4A1P02462 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A1P02462 RAD1P1-201ENST00000231383 813 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL4A1P02462 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL4A1P02462 AC004987.3-201ENST00000413879 771 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.05□□□□□ -1.92
COL4A1P02462 AL139415.2-201ENST00000431968 163 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 snoU13.26-201ENST00000459452 105 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 UBL5P3-201ENST00000475112 231 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 RNA5SP76-201ENST00000516277 87 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL4A1P02462 AL442163.2-201ENST00000553912 710 ntBASIC3.05□□□□□ -1.92
COL4A1P02462 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms