Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RPL21P40-201ENST00000428586 483 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 OR2B8P-201ENST00000432841 938 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 RPL7P59-201ENST00000447700 943 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC091564.1-201ENST00000464563 479 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
SEMA3DO95025 FAM133DP-201ENST00000464802 691 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.17□□□□□ -1.9
SEMA3DO95025 RPL23AP55-201ENST00000498163 452 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 POU5F1P7-201ENST00000508759 541 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.17□□□□□ -1.9
SEMA3DO95025 AC005351.1-201ENST00000511152 786 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 RN7SKP116-201ENST00000516902 319 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.17□□□□□ -1.9
SEMA3DO95025 COX6B1P6-201ENST00000522347 255 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 OR8I1P-201ENST00000529291 931 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC139103.1-201ENST00000534696 1030 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.17□□□□□ -1.9
SEMA3DO95025 AC034105.4-201ENST00000568304 277 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.17□□□□□ -1.9
SEMA3DO95025 MIR5186-201ENST00000577504 120 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 MIR3922-201ENST00000585192 84 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 AC019176.2-201ENST00000611579 315 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 uc_338.1-201ENST00000612113 180 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.17□□□□□ -1.9
SEMA3DO95025 AL355365.1-201ENST00000616480 294 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SEMA3DO95025 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.17□□□□□ -1.9
SEMA3DO95025 FRG1DP-201ENST00000635586 771 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEMA3DO95025 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SEMA3DO95025 AL049737.1-201ENST00000413920 1403 ntBASIC3.17□□□□□ -1.9
SEMA3DO95025 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.16□□□□□ -1.9
SEMA3DO95025 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.16□□□□□ -1.9
SEMA3DO95025 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEMA3DO95025 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEMA3DO95025 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SEMA3DO95025 SNORA62.3-201ENST00000365110 153 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SEMA3DO95025 UBE2V1P15-201ENST00000407776 448 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 RPS7P15-201ENST00000415804 584 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC245052.5-201ENST00000416320 649 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 ETF1P3-201ENST00000430422 1160 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 ISCA1P2-201ENST00000438679 421 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 HMGB3P11-201ENST00000440127 604 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 RPS27P5-201ENST00000444247 244 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
SEMA3DO95025 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.16□□□□□ -1.9
SEMA3DO95025 MTCO2P32-201ENST00000514865 403 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 RN7SKP283-201ENST00000517197 270 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
SEMA3DO95025 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 MIR4276-201ENST00000584832 70 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 AL109653.1-201ENST00000603091 248 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 AC079610.2-201ENST00000604818 690 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 AL354696.1-201ENST00000614652 497 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 MIR6864-201ENST00000617935 70 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.16□□□□□ -1.9
SEMA3DO95025 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
SEMA3DO95025 Z83843.1-201ENST00000604070 3685 ntBASIC3.16□□□□□ -1.9
SEMA3DO95025 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
SEMA3DO95025 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.15□□□□□ -1.9
SEMA3DO95025 AL589826.1-201ENST00000340697 249 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 SNORD56.3-201ENST00000363507 71 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 RNU1-33P-201ENST00000364249 162 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 AL355379.1-201ENST00000405542 640 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.15□□□□□ -1.91
SEMA3DO95025 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.15□□□□□ -1.91
SEMA3DO95025 PTP4A1P3-201ENST00000433661 420 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 AC005019.1-201ENST00000436455 431 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 CST9LP2-201ENST00000437612 320 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.15□□□□□ -1.91
SEMA3DO95025 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.15□□□□□ -1.91
SEMA3DO95025 RPL26P28-201ENST00000451325 435 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.15□□□□□ -1.91
SEMA3DO95025 PLGLA-201ENST00000465668 449 ntBASIC3.15□□□□□ -1.91
SEMA3DO95025 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SEMA3DO95025 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.15□□□□□ -1.91
SEMA3DO95025 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.15□□□□□ -1.91
SEMA3DO95025 AC008494.2-201ENST00000514544 370 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms