Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.71□□□□□ -1.5
VAMP4O75379 RPEP2-201ENST00000432149 701 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 AC109583.1-201ENST00000432156 268 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 H2AFZP6-201ENST00000444403 394 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAMP4O75379 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.71□□□□□ -1.5
VAMP4O75379 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.71□□□□□ -1.5
VAMP4O75379 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 AC013267.1-201ENST00000458227 267 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.71□□□□□ -1.5
VAMP4O75379 AC108078.1-201ENST00000508073 725 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.71□□□□□ -1.5
VAMP4O75379 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.71□□□□□ -1.5
VAMP4O75379 AF131216.2-201ENST00000512316 564 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 AC108064.1-201ENST00000513791 460 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 RNU6-430P-201ENST00000517078 107 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 AP001646.1-201ENST00000527936 915 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.71□□□□□ -1.5
VAMP4O75379 AC137800.2-201ENST00000574375 120 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 AC079587.1-201ENST00000603846 277 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 AC243773.3-201ENST00000613270 256 ntBASIC5.71□□□□□ -1.5
VAMP4O75379 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.71□□□□□ -1.5
VAMP4O75379 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VAMP4O75379 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.71□□□□□ -1.5
VAMP4O75379 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.71□□□□□ -1.5
VAMP4O75379 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAMP4O75379 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.7□□□□□ -1.5
VAMP4O75379 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.7□□□□□ -1.5
VAMP4O75379 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VAMP4O75379 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
VAMP4O75379 Y_RNA.372-201ENST00000365599 102 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.7□□□□□ -1.5
VAMP4O75379 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VAMP4O75379 U8.14-201ENST00000390843 143 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 FCF1P10-201ENST00000407590 479 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 RN7SKP285-201ENST00000410137 318 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 Y_RNA.625-201ENST00000411256 107 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 RPS3AP3-201ENST00000411933 242 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VAMP4O75379 AL592293.2-201ENST00000422292 996 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.7□□□□□ -1.5
VAMP4O75379 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 BX890604.2-201ENST00000427883 474 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 MTND4LP10-201ENST00000435146 291 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AC073614.1-201ENST00000438690 650 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 RABEPKP1-201ENST00000440529 1026 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.7□□□□□ -1.5
VAMP4O75379 AL662791.1-201ENST00000441992 928 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 SNRPEP8-201ENST00000442866 260 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 RNA5SP103-201ENST00000459503 118 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 RPS27AP17-201ENST00000463344 455 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 NIP7P2-201ENST00000485801 544 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.7□□□□□ -1.5
VAMP4O75379 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.7□□□□□ -1.5
VAMP4O75379 KCTD9P2-201ENST00000512203 1013 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AC114781.4-201ENST00000513707 639 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 Y_RNA.702-201ENST00000516843 96 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.7□□□□□ -1.5
VAMP4O75379 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.7□□□□□ -1.5
VAMP4O75379 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.7□□□□□ -1.5
VAMP4O75379 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.7□□□□□ -1.5
VAMP4O75379 AC090502.2-201ENST00000549267 280 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.7□□□□□ -1.5
VAMP4O75379 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.7□□□□□ -1.5
VAMP4O75379 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.7□□□□□ -1.5
VAMP4O75379 AC112191.3-201ENST00000604371 277 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AL356218.2-201ENST00000605264 187 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AL353621.2-201ENST00000605340 133 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 SNORD91B-202ENST00000608459 222 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AC092954.2-201ENST00000609103 430 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AC103710.4-201ENST00000609301 899 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AL136295.6-201ENST00000610486 658 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AC008250.2-201ENST00000615261 205 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 AC104010.1-201ENST00000616889 150 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.7□□□□□ -1.5
VAMP4O75379 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.7□□□□□ -1.5
VAMP4O75379 AC015908.5-201ENST00000623289 343 ntBASIC5.7□□□□□ -1.5
VAMP4O75379 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.7□□□□□ -1.5
VAMP4O75379 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAMP4O75379 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VAMP4O75379 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAMP4O75379 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.7□□□□□ -1.5
VAMP4O75379 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VAMP4O75379 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VAMP4O75379 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VAMP4O75379 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.7□□□□□ -1.5
VAMP4O75379 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP4O75379 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VAMP4O75379 AC021242.1-201ENST00000507315 2035 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
VAMP4O75379 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP4O75379 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VAMP4O75379 RNA5SP307-201ENST00000362863 116 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 SNORA72.1-201ENST00000363485 129 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 RNY4P14-201ENST00000363656 96 ntBASIC5.69□□□□□ -1.5
VAMP4O75379 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VAMP4O75379 RN7SKP216-201ENST00000411050 312 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms