Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4BO75351 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 OR11H4-201ENST00000315409 1082 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 RNU6-769P-201ENST00000384407 104 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 MIR195-201ENST00000385194 87 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 SNORD96B-201ENST00000386148 79 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 RNA5SP372-201ENST00000390836 115 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 U8.14-201ENST00000390843 143 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 RNA5SP332-201ENST00000391063 115 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 EIF5P1-201ENST00000400019 1231 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 DHFRP6-201ENST00000401776 268 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 ARL4AP5-201ENST00000404372 599 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 Y_RNA.598-201ENST00000410480 95 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 RNA5SP113-201ENST00000410486 84 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4BO75351 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS4BO75351 AL445669.1-201ENST00000426743 755 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 RPL7P11-201ENST00000437586 658 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 RSU1P2-202ENST00000437884 485 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 PGBD4P3-201ENST00000440731 581 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS4BO75351 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS4BO75351 PDSS1P2-201ENST00000449397 678 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 EIF4A1P11-201ENST00000451239 222 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AL033528.1-201ENST00000453780 140 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 USP9YP34-201ENST00000453983 808 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4BO75351 RN7SL41P-201ENST00000476144 297 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 DEFB109F-201ENST00000491870 277 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4BO75351 GAPDHP56-201ENST00000506031 988 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC111000.3-201ENST00000508057 576 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 AC021146.3-201ENST00000511911 260 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 AC104057.1-201ENST00000515547 497 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 RNU6-1178P-201ENST00000516674 107 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 COX6CP8-201ENST00000522620 226 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS4BO75351 AC022878.1-201ENST00000530684 149 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 AC013828.2-201ENST00000532487 235 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AP002453.2-201ENST00000533503 320 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS4BO75351 MIR5186-201ENST00000577504 120 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 BNIP3P23-201ENST00000599655 511 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC080013.4-201ENST00000607624 649 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 AP001521.2-201ENST00000608772 546 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC131902.3-201ENST00000611767 581 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC026368.1-201ENST00000614934 690 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 AC108479.2-201ENST00000617314 601 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS4BO75351 AC005086.4-201ENST00000623065 213 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS4BO75351 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
VPS4BO75351 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 AC007529.1-201ENST00000418574 2178 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 DCAF13P1-201ENST00000495256 1330 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 MTND5P26-201ENST00000426018 1752 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 AC090971.4-201ENST00000560291 1800 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 TLK1P1-201ENST00000456760 2440 ntBASIC4.62□□□□□ -1.67
VPS4BO75351 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
VPS4BO75351 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS4BO75351 AL672167.1-205ENST00000641112 3080 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4BO75351 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4BO75351 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 AL136164.3-201ENST00000624429 3978 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
VPS4BO75351 AC012020.1-201ENST00000624541 1728 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS4BO75351 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4BO75351 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS4BO75351 SNORA40.3-201ENST00000390964 122 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 ZNF603P-201ENST00000405613 487 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AIMP1P1-201ENST00000418670 937 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 Z97055.1-201ENST00000419730 712 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 EIF1P1-201ENST00000421436 341 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 AL513174.1-201ENST00000423182 629 ntBASIC4.61□□□□□ -1.67
VPS4BO75351 RPL7P57-201ENST00000423238 740 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms