Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 SNORD105B-201ENST00000458770 79 ntBASIC3.59□□□□□ -1.83
SDC3O75056 RPL21P10-201ENST00000463521 490 ntBASIC3.59□□□□□ -1.83
SDC3O75056 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.59□□□□□ -1.83
SDC3O75056 CAB39P1-201ENST00000502277 460 ntBASIC3.59□□□□□ -1.83
SDC3O75056 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDC3O75056 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDC3O75056 MTND3P3-201ENST00000505004 126 ntBASIC3.59□□□□□ -1.83
SDC3O75056 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDC3O75056 AC069306.1-201ENST00000507006 843 ntBASIC3.59□□□□□ -1.83
SDC3O75056 AC118282.2-201ENST00000508739 374 ntBASIC3.59□□□□□ -1.83
SDC3O75056 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC3O75056 AC010342.1-201ENST00000514047 877 ntBASIC3.59□□□□□ -1.83
SDC3O75056 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDC3O75056 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC3O75056 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC3O75056 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC3O75056 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC3O75056 MIR5195-201ENST00000583555 115 ntBASIC3.59□□□□□ -1.83
SDC3O75056 AF131215.7-201ENST00000602443 707 ntBASIC3.59□□□□□ -1.83
SDC3O75056 AC007687.1-201ENST00000602704 304 ntBASIC3.59□□□□□ -1.83
SDC3O75056 AL020997.3-201ENST00000602843 359 ntBASIC3.59□□□□□ -1.83
SDC3O75056 AC002487.1-201ENST00000604565 994 ntBASIC3.59□□□□□ -1.83
SDC3O75056 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.59□□□□□ -1.83
SDC3O75056 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.59□□□□□ -1.83
SDC3O75056 AC105227.2-201ENST00000615075 605 ntBASIC3.59□□□□□ -1.83
SDC3O75056 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC3O75056 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.59□□□□□ -1.83
SDC3O75056 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.59□□□□□ -1.83
SDC3O75056 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SDC3O75056 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
SDC3O75056 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.59□□□□□ -1.84
SDC3O75056 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.59□□□□□ -1.84
SDC3O75056 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SDC3O75056 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SDC3O75056 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SDC3O75056 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 NCAPGP1-201ENST00000505112 1814 ntBASIC3.58□□□□□ -1.84
SDC3O75056 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SDC3O75056 AL365440.1-201ENST00000436135 2167 ntBASIC3.58□□□□□ -1.84
SDC3O75056 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SDC3O75056 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SDC3O75056 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SDC3O75056 RNU6-374P-201ENST00000364146 108 ntBASIC3.58□□□□□ -1.84
SDC3O75056 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SDC3O75056 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SDC3O75056 RNU6-441P-201ENST00000384545 106 ntBASIC3.58□□□□□ -1.84
SDC3O75056 MT-TC-201ENST00000387405 66 ntBASIC3.58□□□□□ -1.84
SDC3O75056 RNU6-1000P-201ENST00000391066 106 ntBASIC3.58□□□□□ -1.84
SDC3O75056 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.58□□□□□ -1.84
SDC3O75056 RPL31P2-201ENST00000413849 377 ntBASIC3.58□□□□□ -1.84
SDC3O75056 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.58□□□□□ -1.84
SDC3O75056 AC027644.1-201ENST00000419595 298 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC245054.1-201ENST00000420944 258 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC091390.3-201ENST00000426478 338 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.58□□□□□ -1.84
SDC3O75056 AC096632.1-201ENST00000427395 310 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC092634.2-201ENST00000428146 1010 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC097713.2-201ENST00000430199 356 ntBASIC3.58□□□□□ -1.84
SDC3O75056 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.58□□□□□ -1.84
SDC3O75056 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 MTCYBP15-201ENST00000433123 1127 ntBASIC3.58□□□□□ -1.84
SDC3O75056 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 AC234064.1-201ENST00000436312 247 ntBASIC3.58□□□□□ -1.84
SDC3O75056 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 AC092641.1-201ENST00000440229 772 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC007967.1-201ENST00000455422 1159 ntBASIC3.58□□□□□ -1.84
SDC3O75056 MTND2P39-201ENST00000457230 764 ntBASIC3.58□□□□□ -1.84
SDC3O75056 TMED11P-201ENST00000479478 690 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.58□□□□□ -1.84
SDC3O75056 AC104057.1-201ENST00000515547 497 ntBASIC3.58□□□□□ -1.84
SDC3O75056 IGKV2D-36-201ENST00000518643 226 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.58□□□□□ -1.84
SDC3O75056 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.58□□□□□ -1.84
SDC3O75056 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.58□□□□□ -1.84
SDC3O75056 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 AC092470.1-201ENST00000546187 132 ntBASIC3.58□□□□□ -1.84
SDC3O75056 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.58□□□□□ -1.84
SDC3O75056 MIR4666A-201ENST00000580160 79 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AC020914.6-201ENST00000594327 272 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AL031985.2-201ENST00000600955 480 ntBASIC3.58□□□□□ -1.84
SDC3O75056 RPAP2P1-201ENST00000603626 1168 ntBASIC3.58□□□□□ -1.84
SDC3O75056 Z82195.1-201ENST00000604558 398 ntBASIC3.58□□□□□ -1.84
SDC3O75056 IGHV3-29-201ENST00000604817 344 ntBASIC3.58□□□□□ -1.84
SDC3O75056 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.58□□□□□ -1.84
SDC3O75056 RNU6-1192P-201ENST00000612197 107 ntBASIC3.58□□□□□ -1.84
SDC3O75056 VN1R74P-201ENST00000613259 503 ntBASIC3.58□□□□□ -1.84
SDC3O75056 RNU6-489P-201ENST00000618289 107 ntBASIC3.58□□□□□ -1.84
SDC3O75056 VN1R7P-201ENST00000619242 903 ntBASIC3.58□□□□□ -1.84
SDC3O75056 U7.8-201ENST00000619968 63 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.58□□□□□ -1.84
SDC3O75056 AP000553.6-201ENST00000641242 118 ntBASIC3.58□□□□□ -1.84
SDC3O75056 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SDC3O75056 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.58□□□□□ -1.84
SDC3O75056 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.58□□□□□ -1.84
SDC3O75056 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms