Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.76□□□□□ -1.81
PRKNO60260 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 AC107081.3-201ENST00000612715 2034 ntBASIC3.76□□□□□ -1.81
PRKNO60260 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKNO60260 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PRKNO60260 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.76□□□□□ -1.81
PRKNO60260 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 OR5BR1P-201ENST00000524992 1330 ntBASIC3.75□□□□□ -1.81
PRKNO60260 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PRKNO60260 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.75□□□□□ -1.81
PRKNO60260 Y_RNA.18-201ENST00000362461 102 ntBASIC3.75□□□□□ -1.81
PRKNO60260 RNA5SP388-201ENST00000362584 119 ntBASIC3.75□□□□□ -1.81
PRKNO60260 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.75□□□□□ -1.81
PRKNO60260 RNU6-216P-201ENST00000363282 104 ntBASIC3.75□□□□□ -1.81
PRKNO60260 SNORA57.1-201ENST00000391227 145 ntBASIC3.75□□□□□ -1.81
PRKNO60260 RPL23AP29-201ENST00000397284 453 ntBASIC3.75□□□□□ -1.81
PRKNO60260 CYCSP45-201ENST00000402289 315 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AL450338.1-201ENST00000407987 512 ntBASIC3.75□□□□□ -1.81
PRKNO60260 RNU6-628P-201ENST00000410675 107 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKNO60260 AL035407.1-201ENST00000429211 571 ntBASIC3.75□□□□□ -1.81
PRKNO60260 VDAC1P6-201ENST00000430062 855 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKNO60260 AC098826.1-201ENST00000433943 471 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC129850.1-201ENST00000436203 508 ntBASIC3.75□□□□□ -1.81
PRKNO60260 MTCO2P16-201ENST00000436962 677 ntBASIC3.75□□□□□ -1.81
PRKNO60260 MTCYBP39-201ENST00000437562 491 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKNO60260 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.75□□□□□ -1.81
PRKNO60260 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKNO60260 AC133473.1-201ENST00000455173 299 ntBASIC3.75□□□□□ -1.81
PRKNO60260 RPL18AP17-201ENST00000455326 198 ntBASIC3.75□□□□□ -1.81
PRKNO60260 MTND4LP3-201ENST00000468320 276 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC072039.1-201ENST00000477611 581 ntBASIC3.75□□□□□ -1.81
PRKNO60260 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.75□□□□□ -1.81
PRKNO60260 RPL29P14-201ENST00000495837 428 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKNO60260 MTCYBP17-201ENST00000503579 789 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC112198.1-201ENST00000505369 1220 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC091435.1-201ENST00000505442 584 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKNO60260 LTV1P1-201ENST00000510683 1237 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.75□□□□□ -1.81
PRKNO60260 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.75□□□□□ -1.81
PRKNO60260 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.75□□□□□ -1.81
PRKNO60260 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKNO60260 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.75□□□□□ -1.81
PRKNO60260 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.75□□□□□ -1.81
PRKNO60260 AC090502.2-201ENST00000549267 280 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.75□□□□□ -1.81
PRKNO60260 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.75□□□□□ -1.81
PRKNO60260 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.75□□□□□ -1.81
PRKNO60260 SNORD39.3-201ENST00000584451 71 ntBASIC3.75□□□□□ -1.81
PRKNO60260 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.75□□□□□ -1.81
PRKNO60260 AF131215.7-201ENST00000602443 707 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC012603.1-201ENST00000606424 528 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC092650.2-201ENST00000619984 902 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC008443.7-201ENST00000622195 246 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AP006248.2-201ENST00000623309 592 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC098679.5-201ENST00000624394 571 ntBASIC3.75□□□□□ -1.81
PRKNO60260 AC092184.1-201ENST00000625042 715 ntBASIC3.75□□□□□ -1.81
PRKNO60260 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
PRKNO60260 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PRKNO60260 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 AL390862.1-201ENST00000635467 1469 ntBASIC3.74□□□□□ -1.81
PRKNO60260 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 XPOTP1-201ENST00000443317 2398 ntBASIC3.74□□□□□ -1.81
PRKNO60260 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PRKNO60260 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 Y_RNA.51-201ENST00000362725 102 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RNU1-85P-201ENST00000364127 164 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RN7SKP280-201ENST00000364196 304 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RNU6-1122P-201ENST00000384449 107 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RPL31P52-201ENST00000407532 367 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RNU2-28P-201ENST00000410457 189 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RNA5SP146-201ENST00000410743 123 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RPS15AP38-201ENST00000413110 372 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKNO60260 AL691449.1-201ENST00000426570 421 ntBASIC3.74□□□□□ -1.81
PRKNO60260 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 MTND1P20-201ENST00000430341 950 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RPL36P19-201ENST00000430744 301 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKNO60260 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.74□□□□□ -1.81
PRKNO60260 MTND2P19-201ENST00000449129 1012 ntBASIC3.74□□□□□ -1.81
PRKNO60260 SLC31A1P1-201ENST00000451221 567 ntBASIC3.74□□□□□ -1.81
PRKNO60260 HMGN3P1-201ENST00000453847 193 ntBASIC3.74□□□□□ -1.81
PRKNO60260 MTCO3P11-201ENST00000455103 774 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms