Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HSPA8P13-201ENST00000523715 472 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TRIM38O00635 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM38O00635 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM38O00635 OR8L1P-201ENST00000534005 955 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM38O00635 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM38O00635 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
TRIM38O00635 CYCSP2-201ENST00000558168 301 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC084783.1-201ENST00000565846 910 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC069061.3-201ENST00000582254 823 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 KPNA2P3-201ENST00000584190 848 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 RPL23AP92-201ENST00000603609 255 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 AC091965.4-201ENST00000607691 587 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM38O00635 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRIM38O00635 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TRIM38O00635 ZNF734P-201ENST00000419494 1534 ntBASIC4.62□□□□□ -1.67
TRIM38O00635 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM38O00635 AC017104.4-201ENST00000636283 1592 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM38O00635 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 OR56B2P-202ENST00000641377 2453 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 Y_RNA.6-201ENST00000362350 114 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 Y_RNA.88-201ENST00000363029 99 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 RNU6-553P-201ENST00000364047 96 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 RNU6-1200P-201ENST00000384162 107 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 snosnR66.1-201ENST00000391095 99 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 EIF5P1-201ENST00000400019 1231 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 MIR921-201ENST00000401133 56 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AL591848.1-201ENST00000413092 322 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 PDSS1P1-201ENST00000422953 1114 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM38O00635 AC004975.1-201ENST00000428733 208 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM38O00635 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM38O00635 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 AC097493.1-201ENST00000463958 372 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 SYPL1P1-201ENST00000473622 768 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM38O00635 AC022447.1-201ENST00000515358 464 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 HIGD1AP3-201ENST00000515857 278 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
TRIM38O00635 AP001781.1-201ENST00000530977 207 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM38O00635 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM38O00635 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM38O00635 AC105129.1-201ENST00000560250 297 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AC087481.2-201ENST00000565492 330 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AC090616.2-202ENST00000584248 222 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM38O00635 OR4G1P-201ENST00000588632 938 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 SLC25A36P1-201ENST00000590111 465 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 HMGB2P1-201ENST00000591146 634 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 YWHAQP7-201ENST00000603536 658 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AC092653.1-201ENST00000608509 531 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM38O00635 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 CYP3A51P-201ENST00000633513 256 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AC055839.1-201ENST00000634467 498 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM38O00635 U6.101-201ENST00000637707 76 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 A2MP1-204ENST00000566278 4130 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 AC004520.1-201ENST00000608362 1413 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 AL592182.3-201ENST00000642132 3304 ntBASIC4.61□□□□□ -1.67
TRIM38O00635 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM38O00635 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM38O00635 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM38O00635 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM38O00635 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 ARF4P3-201ENST00000397387 509 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 PIGPP2-201ENST00000411569 458 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 OFD1P18Y-201ENST00000420889 959 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM38O00635 AC244035.1-201ENST00000430042 390 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM38O00635 ARPC3P5-201ENST00000448802 534 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AL162591.2-201ENST00000449634 317 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 RPL23AP35-201ENST00000451906 501 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 NUTF2P7-201ENST00000453086 375 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC079168.2-201ENST00000453977 416 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 RPL7AP28-201ENST00000464513 571 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 RPL7P22-201ENST00000466005 733 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM38O00635 OR5H5P-201ENST00000503164 928 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC116353.2-201ENST00000505332 712 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms