Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
O00370 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.96□□□□□ -1.78
O00370 OR8K4P-201ENST00000534608 872 ntBASIC3.96□□□□□ -1.78
O00370 AC004217.3-201ENST00000551552 878 ntBASIC3.96□□□□□ -1.78
O00370 AC023813.2-201ENST00000564321 469 ntBASIC3.96□□□□□ -1.78
O00370 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.96□□□□□ -1.78
O00370 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.96□□□□□ -1.78
O00370 VN1R83P-201ENST00000595685 445 ntBASIC3.96□□□□□ -1.78
O00370 U73479.1-201ENST00000618062 168 ntBASIC3.96□□□□□ -1.78
O00370 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.96□□□□□ -1.78
O00370 AL158163.2-201ENST00000619110 700 ntBASIC3.96□□□□□ -1.78
O00370 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.96□□□□□ -1.78
O00370 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.96□□□□□ -1.78
O00370 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.96□□□□□ -1.78
O00370 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.96□□□□□ -1.78
O00370 MTND4P8-201ENST00000514997 1362 ntBASIC3.96□□□□□ -1.78
O00370 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
O00370 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.96□□□□□ -1.78
O00370 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.96□□□□□ -1.78
O00370 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
O00370 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
O00370 MTCO1P24-201ENST00000515438 1558 ntBASIC3.95□□□□□ -1.78
O00370 GABPAP-201ENST00000419271 1356 ntBASIC3.95□□□□□ -1.78
O00370 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
O00370 RNU4-68P-201ENST00000364314 141 ntBASIC3.95□□□□□ -1.78
O00370 AL079342.2-201ENST00000403367 482 ntBASIC3.95□□□□□ -1.78
O00370 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.95□□□□□ -1.78
O00370 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
O00370 RN7SKP159-201ENST00000410657 292 ntBASIC3.95□□□□□ -1.78
O00370 SNORA57.3-201ENST00000411095 141 ntBASIC3.95□□□□□ -1.78
O00370 CYCSP19-201ENST00000411715 316 ntBASIC3.95□□□□□ -1.78
O00370 AL592310.1-201ENST00000414330 671 ntBASIC3.95□□□□□ -1.78
O00370 AL513175.1-201ENST00000431492 780 ntBASIC3.95□□□□□ -1.78
O00370 AL035246.1-201ENST00000433554 1255 ntBASIC3.95□□□□□ -1.78
O00370 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.95□□□□□ -1.78
O00370 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.95□□□□□ -1.78
O00370 Z77249.1-201ENST00000444622 1175 ntBASIC3.95□□□□□ -1.78
O00370 AC112492.1-201ENST00000449607 712 ntBASIC3.95□□□□□ -1.78
O00370 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.95□□□□□ -1.78
O00370 RPS15AP1-201ENST00000457423 391 ntBASIC3.95□□□□□ -1.78
O00370 AC022034.3-201ENST00000471393 478 ntBASIC3.95□□□□□ -1.78
O00370 AC007537.2-201ENST00000472093 511 ntBASIC3.95□□□□□ -1.78
O00370 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.95□□□□□ -1.78
O00370 AC048346.1-201ENST00000510247 144 ntBASIC3.95□□□□□ -1.78
O00370 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.95□□□□□ -1.78
O00370 SNORA70.14-201ENST00000516205 110 ntBASIC3.95□□□□□ -1.78
O00370 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
O00370 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.95□□□□□ -1.78
O00370 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.95□□□□□ -1.78
O00370 AC006960.3-201ENST00000561845 705 ntBASIC3.95□□□□□ -1.78
O00370 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.95□□□□□ -1.78
O00370 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.95□□□□□ -1.78
O00370 AC010928.3-201ENST00000587712 541 ntBASIC3.95□□□□□ -1.78
O00370 AC093227.2-201ENST00000589357 285 ntBASIC3.95□□□□□ -1.78
O00370 MTND3P19-201ENST00000603825 345 ntBASIC3.95□□□□□ -1.78
O00370 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.95□□□□□ -1.78
O00370 AC063944.3-201ENST00000609969 533 ntBASIC3.95□□□□□ -1.78
O00370 AL592148.2-201ENST00000612210 372 ntBASIC3.95□□□□□ -1.78
O00370 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.95□□□□□ -1.78
O00370 AC006386.1-201ENST00000619436 415 ntBASIC3.95□□□□□ -1.78
O00370 AC013470.4-201ENST00000619978 986 ntBASIC3.95□□□□□ -1.78
O00370 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.95□□□□□ -1.78
O00370 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.95□□□□□ -1.78
O00370 AL157700.1-201ENST00000561973 1432 ntBASIC3.95□□□□□ -1.78
O00370 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
O00370 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.95□□□□□ -1.78
O00370 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
O00370 AC011978.2-201ENST00000569835 2054 ntBASIC3.94□□□□□ -1.78
O00370 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
O00370 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
O00370 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
O00370 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
O00370 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
O00370 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
O00370 AC107081.3-201ENST00000612715 2034 ntBASIC3.94□□□□□ -1.78
O00370 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
O00370 HMGB1P5-201ENST00000255320 642 ntBASIC3.94□□□□□ -1.78
O00370 RNA5SP189-201ENST00000364920 115 ntBASIC3.94□□□□□ -1.78
O00370 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
O00370 RNU6-636P-201ENST00000384598 107 ntBASIC3.94□□□□□ -1.78
O00370 AL445189.1-201ENST00000405722 338 ntBASIC3.94□□□□□ -1.78
O00370 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.94□□□□□ -1.78
O00370 MIR1250-201ENST00000408098 113 ntBASIC3.94□□□□□ -1.78
O00370 AC073264.1-201ENST00000411508 416 ntBASIC3.94□□□□□ -1.78
O00370 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.94□□□□□ -1.78
O00370 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
O00370 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.94□□□□□ -1.78
O00370 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.94□□□□□ -1.78
O00370 RPL36P19-201ENST00000430744 301 ntBASIC3.94□□□□□ -1.78
O00370 AL445584.1-201ENST00000431451 330 ntBASIC3.94□□□□□ -1.78
O00370 MTND2P5-201ENST00000432656 1006 ntBASIC3.94□□□□□ -1.78
O00370 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.94□□□□□ -1.78
O00370 NOTCH2P1-201ENST00000443481 624 ntBASIC3.94□□□□□ -1.78
O00370 RPS29P31-201ENST00000446147 164 ntBASIC3.94□□□□□ -1.78
O00370 NPM1P49-201ENST00000448027 714 ntBASIC3.94□□□□□ -1.78
O00370 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.94□□□□□ -1.78
O00370 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.94□□□□□ -1.78
O00370 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms