Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CCDC188H7C350 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC188H7C350 PWAR6-201ENST00000552334 4618 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC188H7C350 ZNF29P-201ENST00000225587 168 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC188H7C350 RNU4-68P-201ENST00000364314 141 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.89□□□□□ -1.79
CCDC188H7C350 SNORA51.6-201ENST00000384151 125 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC188H7C350 TAF9BP1-201ENST00000396646 746 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 MTCO2P8-201ENST00000412213 658 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 MTATP6P20-201ENST00000414147 562 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC188H7C350 RPL31P54-201ENST00000429803 370 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC188H7C350 RPL21P112-201ENST00000434403 463 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC188H7C350 NDUFB1P1-201ENST00000435191 180 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 AC127537.2-201ENST00000439258 465 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 AC007327.1-201ENST00000447461 264 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 HMGN2P21-201ENST00000447764 270 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC188H7C350 ZNF886P-201ENST00000450781 723 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AC068587.1-201ENST00000483613 781 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC188H7C350 KLRA1P-201ENST00000503499 986 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 MTCYBP16-201ENST00000509187 1129 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC188H7C350 RNU6-1225P-201ENST00000516336 65 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AP000619.3-201ENST00000535634 1127 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AL121766.1-201ENST00000547436 487 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 MIR5096-201ENST00000583713 70 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC188H7C350 SNRPGP15-201ENST00000600149 222 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AL365503.1-201ENST00000605247 905 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 RNU4-5P-201ENST00000607255 135 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AL732372.2-225ENST00000642124 456 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC188H7C350 CDR1-202ENST00000625883 1485 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC188H7C350 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC188H7C350 GDI2P1-201ENST00000429312 1336 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 AC109315.1-201ENST00000584143 1347 ntBASIC3.89□□□□□ -1.79
CCDC188H7C350 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCDC188H7C350 AC099786.3-201ENST00000565735 1410 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC188H7C350 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC188H7C350 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC188H7C350 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC188H7C350 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC188H7C350 XIAPP3-201ENST00000312918 795 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 U3.22-201ENST00000391120 215 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AL136116.1-201ENST00000403591 381 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 RNU4-6P-201ENST00000410804 122 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AL592293.2-201ENST00000422292 996 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC188H7C350 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC188H7C350 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC188H7C350 OR10R1P-201ENST00000441524 1141 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AL589880.1-201ENST00000448271 287 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 TVP23BP2-201ENST00000455082 615 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 RPS20P24-201ENST00000457473 361 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AC110792.1-201ENST00000491826 472 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC188H7C350 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CCDC188H7C350 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC188H7C350 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC188H7C350 AC023141.12-201ENST00000512399 199 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AC034205.1-201ENST00000520621 638 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AP004371.1-201ENST00000525240 214 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AP004242.1-201ENST00000533701 349 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC188H7C350 TOMM20P2-201ENST00000540082 421 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AC074050.1-201ENST00000563247 211 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AL049838.1-201ENST00000563647 981 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AC015688.2-201ENST00000584523 262 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AC124312.4-201ENST00000605533 310 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AP001521.1-201ENST00000609150 300 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AC006329.2-201ENST00000611491 394 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CCDC188H7C350 AL138478.1-201ENST00000612252 832 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 uc_338.32-201ENST00000615087 172 ntBASIC3.88□□□□□ -1.79
CCDC188H7C350 AC069209.1-201ENST00000619282 651 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms