Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LGI1-209ENST00000627699 664 ntTSL 3 BASIC1.59□□□□□ -2.15
CHKB-CPT1BH3BT56 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
CHKB-CPT1BH3BT56 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
CHKB-CPT1BH3BT56 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.59□□□□□ -2.16
CHKB-CPT1BH3BT56 AL122126.1-201ENST00000546905 1318 ntBASIC1.59□□□□□ -2.16
CHKB-CPT1BH3BT56 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
CHKB-CPT1BH3BT56 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5SP509-201ENST00000364577 119 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5SP210-201ENST00000391034 120 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS27AP11-201ENST00000402798 447 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AF274854.1-201ENST00000413236 615 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AL445528.1-201ENST00000426330 420 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS12P18-201ENST00000442381 270 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 SETP11-201ENST00000473027 690 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 NDUFB5P1-201ENST00000508134 564 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5SP473-201ENST00000516402 125 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC074029.1-201ENST00000552531 1044 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR5694-201ENST00000581190 76 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 NPM1P45-201ENST00000583151 559 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR6889-201ENST00000613185 59 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AL138880.2-201ENST00000616214 239 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR6076-201ENST00000617521 113 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AC079597.1-201ENST00000624306 508 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 RLIMP1-201ENST00000339626 1680 ntBASIC1.58□□□□□ -2.16
CHKB-CPT1BH3BT56 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5SP119-201ENST00000362715 117 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU6-1293P-201ENST00000384077 107 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU1-52P-201ENST00000384190 164 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU6-1072P-201ENST00000384703 107 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RNU6-443P-201ENST00000384780 107 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 MIR181A2-201ENST00000384863 110 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 TAF9BP1-201ENST00000396646 746 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL21P32-201ENST00000419877 477 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AL513175.2-201ENST00000422071 443 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC244033.1-201ENST00000426826 870 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC073508.1-201ENST00000428866 656 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 CNOT7P1-201ENST00000429006 852 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS29P6-201ENST00000438196 145 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC108734.1-201ENST00000439549 399 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL36AP15-201ENST00000444514 266 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 SETP20-201ENST00000457046 852 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 UBDP1-202ENST00000457888 382 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC011276.1-201ENST00000469688 323 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RPS17P11-201ENST00000474297 293 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RPL23AP70-201ENST00000483361 460 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RNA5SP34-201ENST00000516887 130 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 RN7SKP272-201ENST00000516988 232 ntBASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC1.57□□□□□ -2.16
CHKB-CPT1BH3BT56 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms