Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 OR4H12P-201ENST00000556269 907 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 MIR4286-201ENST00000580651 93 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AC022069.1-201ENST00000582910 658 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AL606490.9-201ENST00000603331 271 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 VIS1.1-201ENST00000610517 203 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AC024941.1-201ENST00000612250 334 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AL354976.1-201ENST00000613843 387 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AC097372.4-201ENST00000625025 466 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 CR381572.1-201ENST00000625098 102 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 AC025263.3-201ENST00000622965 1396 ntBASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.69□□□□□ -1.98
RBFOX3A6NFN3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC032011.1-201ENST00000611703 1549 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 OR5T3-201ENST00000303059 1023 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 RNU6-50P-201ENST00000362356 103 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 RNA5SP479-201ENST00000364858 117 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 RNU6-441P-201ENST00000384545 106 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 SNORA57.1-201ENST00000391227 145 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AL356057.1-202ENST00000402263 756 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 OR8G2P-201ENST00000412796 908 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 UBE2V1P9-201ENST00000414760 368 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 RAD23BP2-201ENST00000416003 1207 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC245054.1-201ENST00000420944 258 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AL117339.2-201ENST00000430475 180 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 RPL7P59-201ENST00000447700 943 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC115115.1-201ENST00000449927 248 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 UQCRHP3-201ENST00000451503 251 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 NUTF2P7-201ENST00000453086 375 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 HMGB1P15-201ENST00000453854 435 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC089999.1-201ENST00000460336 374 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 ST13P14-201ENST00000474095 734 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 MTND4LP22-201ENST00000508209 276 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 OR8K4P-201ENST00000534608 872 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC012254.4-201ENST00000588843 273 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC100814.1-201ENST00000606963 623 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC013468.1-201ENST00000608680 598 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC096586.1-201ENST00000610267 561 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AL163051.2-201ENST00000618976 735 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 MTND5P31-201ENST00000419366 1374 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 RLIMP1-201ENST00000339626 1680 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AL365440.1-201ENST00000436135 2167 ntBASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RBFOX3A6NFN3 AC093010.3-201ENST00000570269 15214 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 RNU1-64P-201ENST00000365443 163 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 RNU1-13P-201ENST00000384499 162 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 SNORA46-201ENST00000384762 135 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 RNU4-65P-201ENST00000410473 140 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 RNA5SP344-201ENST00000411081 104 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms