Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC005005.2-201ENST00000420779 380 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 RANP8-201ENST00000444720 713 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 MTND1P31-201ENST00000449206 961 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 RPL37P3-201ENST00000456825 293 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 USP9YP25-201ENST00000457708 443 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 RPL7P47-201ENST00000497299 556 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC091951.3-201ENST00000504093 246 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 NARSP2-201ENST00000518524 679 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 MTCO2P15-201ENST00000532655 656 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AP000619.3-201ENST00000535634 1127 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AL442163.2-201ENST00000553912 710 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC245036.5-201ENST00000596330 847 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC069200.1-201ENST00000609511 323 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC009464.1-201ENST00000615731 469 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AC244205.2-202ENST00000635781 342 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 AP005901.5-201ENST00000545779 1796 ntBASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CSNK1G3Q9Y6M4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AL512646.1-201ENST00000269395 1077 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 MIR208A-201ENST00000362287 71 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AF228730.1-201ENST00000397972 663 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 RNU2-65P-201ENST00000410162 185 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 RPS24P7-201ENST00000416921 246 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 ELOCP9-201ENST00000418624 239 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 MTCO2P21-201ENST00000419780 677 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AL035423.1-201ENST00000420331 213 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 OR4F13P-201ENST00000428478 931 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 SETD6P1-201ENST00000444575 317 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 PTENP1-201ENST00000447117 1215 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC113347.3-201ENST00000509113 148 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC008885.2-201ENST00000509506 930 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 DUXAP5-201ENST00000529668 529 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC023538.1-201ENST00000534576 736 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 OR4U1P-201ENST00000554958 912 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 MTND3P12-201ENST00000559068 328 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 MIR5047-201ENST00000579212 100 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AP001269.3-201ENST00000588718 329 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 PCNAP1-202ENST00000595299 752 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AL357094.1-201ENST00000603845 844 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC024257.5-201ENST00000612739 531 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 AC084757.4-201ENST00000616350 526 ntBASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.75□□□□□ -1.81
CSNK1G3Q9Y6M4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 DCAF13P3-201ENST00000561147 1334 ntBASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 AC007066.1-201ENST00000392902 381 ntBASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.74□□□□□ -1.81
CSNK1G3Q9Y6M4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms