Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NMNAT1P2-201ENST00000435192 860 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 RPL7P11-201ENST00000437586 658 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 Z95327.1-201ENST00000446082 482 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 RPS20P32-201ENST00000456044 356 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 SRRM1P2-201ENST00000464531 1192 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC022795.1-201ENST00000473808 480 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 RN7SL319P-201ENST00000480656 221 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC011825.1-201ENST00000484967 388 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC097173.1-201ENST00000505862 819 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-201P-201ENST00000517100 61 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AP003467.2-201ENST00000520175 319 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 OR4R3P-201ENST00000525084 838 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC091042.1-201ENST00000579213 173 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC004492.1-201ENST00000607036 742 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AP005432.2-201ENST00000608162 586 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC015914.2-201ENST00000618167 288 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC079597.1-201ENST00000624306 508 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 AC090229.1-201ENST00000590983 1609 ntBASIC4.83□□□□□ -1.64
PCDHGA3Q9Y5H0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 Y_RNA.3-201ENST00000362331 103 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-761P-201ENST00000384148 107 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 SNORD51-201ENST00000384320 80 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-248P-201ENST00000410720 107 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 RPL23AP33-201ENST00000442301 452 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AL590399.6-201ENST00000446396 307 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 PPIAP3-201ENST00000450588 505 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC009963.2-201ENST00000453431 138 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 MTND1P9-201ENST00000453775 944 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 TPT1P7-201ENST00000458300 517 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AL591473.1-201ENST00000464297 313 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 RPS4XP10-201ENST00000465034 731 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 ST13P14-201ENST00000474095 734 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC104763.1-201ENST00000475274 360 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 RPL23AP41-201ENST00000484754 458 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 HMGB1P36-201ENST00000487709 576 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC011005.3-201ENST00000491624 395 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC096751.1-202ENST00000502691 1067 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC138853.1-201ENST00000503549 823 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 NDUFB4P2-201ENST00000509515 391 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 IGKV2D-36-201ENST00000518643 226 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 OR5M7P-201ENST00000526140 972 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 RPL21P5-201ENST00000554662 472 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 MIR3667-201ENST00000581025 74 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC009977.1-201ENST00000586015 570 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 NRBF2P1-201ENST00000587407 859 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 LLPHP1-201ENST00000603571 367 ntBASIC4.82□□□□□ -1.64
PCDHGA3Q9Y5H0 AC015871.2-201ENST00000603605 948 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms