Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC087190.4-201ENST00000574616 8334 ntBASIC4.29□□□□□ -1.72
PKP3Q9Y446 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PKP3Q9Y446 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PKP3Q9Y446 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PKP3Q9Y446 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC011978.2-201ENST00000569835 2054 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 CR383658.2-201ENST00000547576 1525 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKP3Q9Y446 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 RNU6-623P-201ENST00000363143 105 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 RNU6-433P-201ENST00000363216 104 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AL121972.1-201ENST00000402023 252 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 MIR1179-201ENST00000408703 91 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AL160275.2-201ENST00000412010 394 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 EEF1E1P1-201ENST00000446998 430 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 MTCO2P18-201ENST00000457151 658 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 MEMO1P3-201ENST00000459811 302 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 RPS20P21-201ENST00000466859 343 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 RPS4XP15-201ENST00000489210 795 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC006499.5-201ENST00000505037 514 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 RN7SKP82-201ENST00000516786 223 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC022790.1-201ENST00000522872 204 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKP3Q9Y446 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AL133457.1-201ENST00000564251 987 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC136618.2-201ENST00000575091 400 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC008507.1-201ENST00000587506 734 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 RN7SKP299-201ENST00000606679 301 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AL159169.3-201ENST00000608871 561 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 AP006248.2-201ENST00000623309 592 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 U6.101-201ENST00000637707 76 ntBASIC4.28□□□□□ -1.72
PKP3Q9Y446 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PKP3Q9Y446 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKP3Q9Y446 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.28□□□□□ -1.72
PKP3Q9Y446 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PKP3Q9Y446 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
PKP3Q9Y446 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
PKP3Q9Y446 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PKP3Q9Y446 SAGE2P-201ENST00000420011 2126 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC007066.1-201ENST00000392902 381 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AL583835.1-201ENST00000399570 407 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 EIF5P1-201ENST00000400019 1231 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 HMGB1P17-201ENST00000403495 628 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 OR8G2P-201ENST00000412796 908 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 RPS15AP40-201ENST00000419621 391 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC092647.1-201ENST00000420654 287 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 RPL18P10-201ENST00000425606 538 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PKP3Q9Y446 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AL831737.1-201ENST00000441288 271 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC026410.2-201ENST00000460281 156 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 RN7SL481P-201ENST00000477764 299 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC104164.2-201ENST00000496953 495 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC010424.1-201ENST00000506336 297 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 MTND4P2-201ENST00000507767 1203 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC091965.2-201ENST00000512324 613 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 RNA5SP360-201ENST00000516555 118 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 RNA5SP73-201ENST00000516744 108 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 AC022882.1-201ENST00000532142 501 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 HSPE1P3-201ENST00000559254 309 ntBASIC4.27□□□□□ -1.73
PKP3Q9Y446 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.27□□□□□ -1.73
PKP3Q9Y446 HNRNPCP4-201ENST00000571636 900 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms