Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 OR8K4P-201ENST00000534608 872 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AL049838.1-201ENST00000563647 981 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC009101.1-201ENST00000568135 242 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 MIR5708-201ENST00000579723 85 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 RPP40P2-201ENST00000603596 712 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 RNU4-5P-201ENST00000607255 135 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 U3.45-201ENST00000607547 219 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC069200.1-201ENST00000609511 323 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AL158163.2-201ENST00000619110 700 ntBASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.8□□□□□ -1.8
NCKAP1Q9Y2A7 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 RNU6-251P-201ENST00000363235 104 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 SNORA40.2-201ENST00000390847 128 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC007066.1-201ENST00000392902 381 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 RPS3AP9-201ENST00000417027 792 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 RPS15AP40-201ENST00000419621 391 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC008065.1-201ENST00000428525 348 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 RPL31P54-201ENST00000429803 370 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 HMGN2P31-201ENST00000432430 273 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AF228730.2-201ENST00000438784 848 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 RPS26P56-201ENST00000444468 240 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 Z77249.1-201ENST00000444622 1175 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 RPS3AP46-201ENST00000448352 682 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC079776.3-201ENST00000450665 370 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 PRSS3P4-201ENST00000453323 162 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 HMGB3P30-201ENST00000457863 606 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC106707.2-201ENST00000484182 374 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC134050.1-201ENST00000495088 933 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 RPL21P131-201ENST00000497298 483 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC104619.4-201ENST00000510773 249 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 RN7SKP277-201ENST00000516895 283 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC022069.1-201ENST00000582910 658 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AP003973.1-201ENST00000604639 691 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC092354.2-201ENST00000607786 514 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC027449.1-201ENST00000608890 407 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL157392.4-201ENST00000609756 345 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AL050303.3-201ENST00000613704 284 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC138649.5-201ENST00000637456 137 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 AC117529.2-201ENST00000512159 2068 ntBASIC3.79□□□□□ -1.8
NCKAP1Q9Y2A7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 ZNF29P-201ENST00000225587 168 ntBASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 RNU6-441P-201ENST00000384545 106 ntBASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 MIR218-2-201ENST00000385006 110 ntBASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 BTBD10P2-201ENST00000404779 676 ntBASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 PTP4A1P5-201ENST00000420305 455 ntBASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 RPF2P1-201ENST00000424137 906 ntBASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 NANOGP2-201ENST00000435391 727 ntBASIC3.78□□□□□ -1.8
NCKAP1Q9Y2A7 AL356535.1-201ENST00000440335 398 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms