Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC006504.1-201ENST00000562493 3666 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 GDI2P1-201ENST00000429312 1336 ntBASIC3.42□□□□□ -1.86
CHRNA9Q9UGM1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 RNA5SP515-201ENST00000364570 118 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AL024474.1-201ENST00000404655 591 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 RNA5SP129-201ENST00000410276 118 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 TOMM22P1-201ENST00000418578 312 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 MTCO2P1-201ENST00000424648 477 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AL591419.1-201ENST00000427423 339 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC005345.1-201ENST00000431868 217 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 KCTD10P1-201ENST00000434203 625 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 MTCO3P16-201ENST00000454456 754 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 RPS20P24-201ENST00000457473 361 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC010285.1-201ENST00000470580 392 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC011352.3-201ENST00000505162 593 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 SCARNA14-201ENST00000516903 136 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC006960.3-201ENST00000561845 705 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC087499.8-201ENST00000578406 226 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 MIR5685-201ENST00000579080 79 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 SNORD39.3-201ENST00000584451 71 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AP003973.1-201ENST00000604639 691 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 SNORA62.6-201ENST00000606322 83 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 VN1R7P-201ENST00000619242 903 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC006927.2-201ENST00000639256 389 ntBASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNA9Q9UGM1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHRNA9Q9UGM1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHRNA9Q9UGM1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHRNA9Q9UGM1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHRNA9Q9UGM1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CHRNA9Q9UGM1 RNU6-582P-201ENST00000362989 107 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 RNA5SP424-201ENST00000390988 115 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 SNORA57.1-201ENST00000391227 145 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 RHEBP3-201ENST00000411920 351 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 HMGB3P15-201ENST00000507326 574 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 SYF2P1-201ENST00000550658 413 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AL121576.1-201ENST00000556055 276 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AC092474.3-201ENST00000603022 568 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 Z82195.1-201ENST00000604558 398 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AL034351.1-201ENST00000605288 668 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AL731566.2-201ENST00000618971 317 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 AC009318.4-201ENST00000620496 486 ntBASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNA9Q9UGM1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms