Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS29Q9UBQ0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 RNA5SP72-201ENST00000364442 117 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 RNA5SP267-201ENST00000364893 126 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 RNU6-452P-201ENST00000384406 107 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 RNA5SP120-201ENST00000410900 112 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AL158156.1-201ENST00000422509 473 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC011242.1-201ENST00000433596 1158 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 RPL6P5-201ENST00000445678 828 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 ARPC3P2-201ENST00000457786 533 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 RN7SL633P-201ENST00000488974 297 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 HSPD1P15-201ENST00000505573 1122 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC002456.2-201ENST00000509356 380 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 MIR4444-1-201ENST00000581696 74 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 MIR4444-2-201ENST00000584390 74 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC005242.1-201ENST00000585658 438 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC006023.2-201ENST00000609916 167 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 AC105227.2-201ENST00000615075 605 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 MIR7112-201ENST00000616126 65 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 U6.48-201ENST00000618523 106 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 OR5BR1P-201ENST00000524992 1330 ntBASIC2.92□□□□□ -1.94
VPS29Q9UBQ0 MAPK10-362ENST00000641864 4484 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 RNU6-335P-201ENST00000364563 113 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 EIF5P1-201ENST00000400019 1231 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 VDAC1P3-201ENST00000434069 851 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 HMGN2P20-201ENST00000437531 273 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AL591503.2-201ENST00000442314 1005 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 RPL7P52-201ENST00000449200 742 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AL513343.1-201ENST00000451818 792 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 PRSS3P4-201ENST00000453323 162 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AC104308.1-201ENST00000454621 333 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 RPL21P104-201ENST00000464143 478 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AP000926.3-201ENST00000497201 299 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AC021087.2-201ENST00000504656 1203 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 MTND4LP22-201ENST00000508209 276 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 HMGB1P23-201ENST00000518743 568 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 MTND2P26-201ENST00000528255 1029 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AL121594.4-201ENST00000556211 1196 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 OR4H12P-201ENST00000556269 907 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 MIR4474-201ENST00000579189 78 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AC012314.7-201ENST00000619693 93 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 AC022031.1-201ENST00000585985 2593 ntBASIC2.91□□□□□ -1.94
VPS29Q9UBQ0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.9□□□□□ -1.94
VPS29Q9UBQ0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.9□□□□□ -1.94
VPS29Q9UBQ0 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.9□□□□□ -1.94
VPS29Q9UBQ0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 SNORA71.3-201ENST00000362582 128 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 LINC01881-201ENST00000416103 412 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 YME1L1P1-201ENST00000429435 297 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 HIGD1AP11-201ENST00000438361 280 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 AL627224.1-201ENST00000448334 444 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 SSXP4-201ENST00000451349 245 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 FTH1P2-201ENST00000466086 412 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 RN7SL807P-201ENST00000470923 297 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 HMGB1P38-201ENST00000490557 577 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 RNA5SP380-201ENST00000517190 98 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 AC055876.1-202ENST00000567053 138 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 MIR6075-201ENST00000620782 95 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.9□□□□□ -1.95
VPS29Q9UBQ0 AL136164.4-201ENST00000625013 2135 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms