Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 AC090971.5-201ENST00000621102 293 ntBASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 ERCC6-202ENST00000374127 1782 ntBASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 AC025125.1-201ENST00000624743 1922 ntBASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PPP4R1LQ9P1A2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AP001642.1-201ENST00000624727 2117 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 Y_RNA.128-201ENST00000363391 112 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 Y_RNA.384-201ENST00000383909 102 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RNU6-171P-201ENST00000384354 107 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 MIR559-201ENST00000385188 96 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 SNORA48.4-201ENST00000391089 134 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RPL23AP32-201ENST00000395315 459 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RNU2-28P-201ENST00000410457 189 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 GAPDHP58-201ENST00000438477 1006 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AL589765.3-201ENST00000446084 462 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AL136380.1-201ENST00000447970 162 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RNU7-136P-201ENST00000458819 69 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC090142.1-201ENST00000465776 462 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RPS3AP50-201ENST00000487064 803 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC006427.1-201ENST00000514359 712 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC112206.3-201ENST00000514578 389 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RNA5SP401-201ENST00000515920 127 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RN7SKP283-201ENST00000517197 270 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC087241.2-201ENST00000535801 324 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC009117.1-201ENST00000563948 554 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 RN7SL708P-201ENST00000580952 299 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC008638.3-201ENST00000603341 463 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC068831.8-201ENST00000620171 435 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC009161.2-201ENST00000624626 138 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 AC135068.12-201ENST00000637370 931 ntBASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PPP4R1LQ9P1A2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 RNU6-223P-201ENST00000362830 107 ntBASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 U3.2-201ENST00000362981 210 ntBASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 RNA5SP90-201ENST00000364801 99 ntBASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 SNORA4.3-201ENST00000365564 137 ntBASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 RNU6-657P-201ENST00000383904 107 ntBASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 RNU6-456P-201ENST00000384493 107 ntBASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 MIR589-201ENST00000385238 99 ntBASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 RNU6-1158P-201ENST00000391167 107 ntBASIC4.78□□□□□ -1.64
PPP4R1LQ9P1A2 RNU6-510P-201ENST00000391239 108 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms