Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AP001350.1-201ENST00000601906 1524 ntBASIC4.36□□□□□ -1.71
BLOC1S4Q9NUP1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.36□□□□□ -1.71
BLOC1S4Q9NUP1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
BLOC1S4Q9NUP1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.36□□□□□ -1.71
BLOC1S4Q9NUP1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 BDP1P-201ENST00000582658 1990 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC244517.1-201ENST00000606030 2086 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 RNU6-1249P-201ENST00000363237 111 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 SNORA72.3-201ENST00000365074 132 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 MIR199A2-201ENST00000385289 110 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 RAB28P1-201ENST00000411517 641 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 Z97055.1-201ENST00000419730 712 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AL050321.1-201ENST00000432363 400 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC096638.2-201ENST00000434965 711 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AL645638.1-201ENST00000440519 361 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AL451050.1-201ENST00000450126 415 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC005410.1-202ENST00000460347 485 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 RPL21P104-201ENST00000464143 478 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC103987.1-201ENST00000473394 348 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC110792.1-201ENST00000491826 472 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 GTF2IP9-201ENST00000502460 301 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC114981.1-201ENST00000503897 678 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 RN7SKP157-201ENST00000516174 282 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 RNU6-352P-201ENST00000516908 107 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 EEF1B2P4-201ENST00000551398 348 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC090695.1-201ENST00000561269 1222 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC007224.1-201ENST00000564410 144 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 MIR4637-201ENST00000582405 84 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 SNORD84-203ENST00000584275 78 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AP001269.3-201ENST00000588718 329 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AL592436.1-201ENST00000605135 558 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AC069304.2-201ENST00000605154 435 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AP003392.5-201ENST00000607857 415 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 U6.101-201ENST00000637707 76 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 AP002001.2-201ENST00000529025 1469 ntBASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
BLOC1S4Q9NUP1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 SNRPEP3-201ENST00000338402 276 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 SNRPEP2-201ENST00000397592 279 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 PPIAP31-201ENST00000405422 495 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 RNU2-37P-201ENST00000410695 177 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC092647.1-201ENST00000420654 287 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AL391219.1-201ENST00000422570 483 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AL049610.1-201ENST00000423374 372 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 OR8F1P-201ENST00000425243 930 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 ATP5HP2-201ENST00000433885 485 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 OFD1P3Y-201ENST00000453312 783 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 SETP14-201ENST00000497538 873 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC026412.2-201ENST00000512270 1075 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC109635.4-202ENST00000531666 412 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 HSPE1P3-201ENST00000559254 309 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC090877.1-201ENST00000561418 344 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC020910.2-201ENST00000603635 610 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC067959.1-201ENST00000604334 379 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC106052.1-201ENST00000608029 497 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 MIR4727-201ENST00000622232 55 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 MIR4278-201ENST00000636094 69 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 MIR1322-201ENST00000638013 71 ntBASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BLOC1S4Q9NUP1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms