Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU4-66P-201ENST00000365199 138 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC104333.2-201ENST00000422630 192 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 RPL12P17-201ENST00000432393 498 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC064862.5-201ENST00000440618 334 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC022215.1-201ENST00000481770 362 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC022133.1-201ENST00000490961 571 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC106872.2-201ENST00000494303 480 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 RNA5SP96-201ENST00000516041 107 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 RN7SKP238-201ENST00000516483 249 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 RNU6-1088P-201ENST00000516850 104 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC022634.1-201ENST00000520765 532 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC018552.3-201ENST00000567416 561 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 MIR4775-201ENST00000581168 75 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 MIR4503-201ENST00000582187 83 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 MIR3936-201ENST00000584304 110 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC068790.3-201ENST00000602988 553 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 AC006363.1-201ENST00000603806 463 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 FAM27E4-201ENST00000605259 342 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSU72Q9NP77 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSU72Q9NP77 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SSU72Q9NP77 SSXP3-201ENST00000442971 1300 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.42□□□□□ -1.54
SSU72Q9NP77 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SSU72Q9NP77 MTND4P14-201ENST00000435799 1354 ntBASIC5.42□□□□□ -1.54
SSU72Q9NP77 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC066616.2-201ENST00000559334 1481 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 RNU6-1309P-201ENST00000363305 108 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 RN7SKP153-201ENST00000365026 316 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 RNY3P13-201ENST00000365542 102 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 RNU6-331P-201ENST00000384724 107 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 MIR548K-201ENST00000408406 116 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC009302.1-201ENST00000417147 390 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 RPL34P3-201ENST00000421454 338 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC093156.1-201ENST00000440382 670 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 AL137792.2-201ENST00000443484 235 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 PRPS1P1-201ENST00000445305 876 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 PPIAP27-201ENST00000453800 265 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 HMGB1P15-201ENST00000453854 435 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 RPS29P15-201ENST00000458329 171 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 RNU6-1218P-201ENST00000458990 108 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 Y_RNA.635-201ENST00000459041 101 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 RNU6-1208P-201ENST00000459588 107 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC005726.1-201ENST00000494679 427 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC091885.1-201ENST00000506658 268 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC093303.1-201ENST00000514549 295 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 OR5B10P-201ENST00000532869 642 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 MIR4472-2-201ENST00000582069 67 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 AP000769.2-201ENST00000602344 396 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 XIAPP1-201ENST00000603162 600 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC130324.3-201ENST00000614165 542 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AP005431.1-201ENST00000618479 319 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 AC244517.12-201ENST00000623581 663 ntBASIC5.41□□□□□ -1.54
SSU72Q9NP77 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SSU72Q9NP77 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSU72Q9NP77 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms