Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 AL445305.1-201ENST00000432577 575 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 AL513124.1-201ENST00000450410 614 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 RN7SL372P-201ENST00000461982 298 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC006499.3-201ENST00000506077 748 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC008716.1-201ENST00000511084 513 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC113155.1-201ENST00000511141 769 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 RNU6-1278P-201ENST00000516130 107 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 RNA5SP278-201ENST00000517055 102 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 AP000648.1-201ENST00000529682 397 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC010287.1-201ENST00000566916 357 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 HNRNPCP4-201ENST00000571636 900 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 CPDP1-201ENST00000579660 283 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC007566.2-201ENST00000603642 413 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 MIR3976-201ENST00000606807 139 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
USB1Q9BQ65 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USB1Q9BQ65 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USB1Q9BQ65 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC027575.3-201ENST00000583058 2747 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USB1Q9BQ65 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USB1Q9BQ65 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 AC020658.2-201ENST00000559030 4020 ntBASIC6.13□□□□□ -1.43
USB1Q9BQ65 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USB1Q9BQ65 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
USB1Q9BQ65 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USB1Q9BQ65 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 MIR411-201ENST00000362239 96 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 RN7SKP130-201ENST00000364924 301 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 Y_RNA.458-201ENST00000384240 102 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 MIR613-201ENST00000385248 95 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 RNU6-700P-201ENST00000391043 107 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 AL591034.2-201ENST00000402839 359 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 RPL12P23-201ENST00000405880 490 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 OR4C10P-201ENST00000434991 931 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 AL445991.1-201ENST00000450381 475 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 AC239809.1-201ENST00000450470 217 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 Z92846.1-201ENST00000456203 268 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 HMGN2P13-201ENST00000476476 274 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 RPL7P23-201ENST00000493874 747 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 OR51K1P-201ENST00000510214 950 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 AC067942.3-201ENST00000512025 362 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 SERF1AP1-201ENST00000514575 187 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 RNA5SP96-201ENST00000516041 107 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 GSTP1P1-201ENST00000548078 319 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 AC004024.1-201ENST00000549244 247 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 RPL7AP69-201ENST00000595306 806 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 AC008962.1-201ENST00000605729 304 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 MRPL57P3-201ENST00000619218 176 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 AL031601.2-202ENST00000622650 282 ntBASIC6.12□□□□□ -1.43
USB1Q9BQ65 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
USB1Q9BQ65 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.12□□□□□ -1.43
USB1Q9BQ65 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 AC068870.1-201ENST00000563737 2455 ntBASIC6.11□□□□□ -1.43
USB1Q9BQ65 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
USB1Q9BQ65 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USB1Q9BQ65 RNU6-682P-201ENST00000363843 106 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms