Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU5D-1-201ENST00000363299 116 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 RNU4-68P-201ENST00000364314 141 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 SNORA72.3-201ENST00000365074 132 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 RNA5SP366-201ENST00000365454 123 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSX3Q99909 SNORA51.6-201ENST00000384151 125 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 PTMAP5-201ENST00000393073 333 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 RPL23AP38-201ENST00000423801 469 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 RPL7P44-201ENST00000424827 742 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.52□□□□□ -1.85
SSX3Q99909 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.52□□□□□ -1.85
SSX3Q99909 AC114495.1-201ENST00000441274 436 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 RFC5P1-201ENST00000454419 874 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SSX3Q99909 PABPC1P3-201ENST00000469174 459 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 RN7SL585P-201ENST00000470538 280 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AC105137.1-201ENST00000484355 562 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 AC134050.1-201ENST00000495088 933 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 RNU6-1225P-201ENST00000516336 65 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 RNA5SP143-201ENST00000516936 115 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSX3Q99909 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 AL389895.1-201ENST00000554127 252 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AL132857.1-201ENST00000555180 708 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.52□□□□□ -1.85
SSX3Q99909 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.52□□□□□ -1.85
SSX3Q99909 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SSX3Q99909 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 AC016877.3-201ENST00000606778 504 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AC092653.1-201ENST00000608509 531 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AL159169.3-201ENST00000608871 561 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 AC023158.2-201ENST00000614876 543 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AC008083.4-201ENST00000615076 444 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 MIR8058-201ENST00000615737 89 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.52□□□□□ -1.85
SSX3Q99909 MIR6891-201ENST00000618788 93 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 AC009318.4-201ENST00000620496 486 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX3Q99909 AC022509.4-201ENST00000621404 572 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 OR52H1-202ENST00000641796 1061 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSX3Q99909 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
SSX3Q99909 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSX3Q99909 AC024560.2-201ENST00000507981 1497 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSX3Q99909 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SSX3Q99909 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.52□□□□□ -1.85
SSX3Q99909 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSX3Q99909 AC107982.1-201ENST00000507171 1300 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 AC109315.1-201ENST00000584143 1347 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSX3Q99909 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSX3Q99909 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSX3Q99909 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SSX3Q99909 RNA5SP307-201ENST00000362863 116 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 RNA5SP175-201ENST00000364275 119 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SSX3Q99909 AL024474.1-201ENST00000404655 591 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 RPS7P15-201ENST00000415804 584 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 RBMY1KP-201ENST00000423480 476 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX3Q99909 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX3Q99909 AC007327.1-201ENST00000447461 264 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSX3Q99909 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSX3Q99909 snoU13.4-201ENST00000458916 104 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 AC005410.1-202ENST00000460347 485 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 PLGLA-201ENST00000465668 449 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 RPL35AP15-201ENST00000468042 339 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 UQCRHP4-201ENST00000471686 272 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SSX3Q99909 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.51□□□□□ -1.85
SSX3Q99909 AC091167.1-201ENST00000492017 396 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 OR4G11P-201ENST00000492842 939 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX3Q99909 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX3Q99909 AC093767.1-201ENST00000504523 156 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 AC025554.1-201ENST00000505641 188 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX3Q99909 AC108064.1-201ENST00000513791 460 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 RNU6-415P-201ENST00000516252 97 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 AC126177.3-201ENST00000551839 688 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 TVP23BP1-201ENST00000557500 617 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms