Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RNU4-29P-201ENST00000515943 174 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 RNU6-273P-201ENST00000516937 96 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 RNU6-89P-201ENST00000606519 100 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 EIF3FP1-201ENST00000613970 806 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AC022418.1-201ENST00000624118 445 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AL049780.3-201ENST00000624612 1583 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 MAPK10-270ENST00000641102 3538 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AC006600.2-201ENST00000624834 2506 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AC144833.1-201ENST00000567953 4089 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AC010329.1-201ENST00000593903 8328 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 NSF-206ENST00000575068 2667 ntTSL 2 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC007159.1-201ENST00000566529 4706 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 Y_RNA.47-201ENST00000362697 108 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 Y_RNA.100-201ENST00000363141 102 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 RNA5SP335-201ENST00000363817 110 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 U3.10-201ENST00000364459 214 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 RNU6-1151P-201ENST00000384684 107 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AL590399.2-201ENST00000427536 309 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 snoU13.24-201ENST00000458998 104 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 RPS15AP17-201ENST00000470598 390 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 DUBR-205ENST00000495228 411 ntTSL 2 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 TMEM251P1-201ENST00000503717 318 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 RN7SKP99-201ENST00000517028 307 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AF279873.1-201ENST00000523393 313 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 APOOP3-201ENST00000536787 586 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC011477.5-201ENST00000586571 259 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 CDC42EP3P1-201ENST00000601004 764 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 OR4F13P-202ENST00000560066 2054 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 AC092125.1-201ENST00000562568 1995 ntBASIC9.3□□□□□ -0.92
TRIM41Q8WV44 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TRIM41Q8WV44 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 STK3-216ENST00000523601 3107 ntTSL 2 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 AC117470.1-201ENST00000381974 330 ntBASIC9.29□□□□□ -0.92
TRIM41Q8WV44 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 CBX1P3-201ENST00000413296 527 ntBASIC9.29□□□□□ -0.92
TRIM41Q8WV44 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 RPS15AP12-201ENST00000419498 388 ntBASIC9.29□□□□□ -0.92
TRIM41Q8WV44 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 Y_RNA.682-201ENST00000516457 100 ntBASIC9.29□□□□□ -0.92
TRIM41Q8WV44 AC122688.1-201ENST00000541494 223 ntBASIC9.29□□□□□ -0.92
TRIM41Q8WV44 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 AL031320.1-201ENST00000604177 357 ntBASIC9.29□□□□□ -0.92
TRIM41Q8WV44 AC091905.4-201ENST00000623432 202 ntBASIC9.29□□□□□ -0.92
TRIM41Q8WV44 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
TRIM41Q8WV44 USP44-208ENST00000552440 1818 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
TRIM41Q8WV44 RNU6-853P-201ENST00000364306 107 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 SNORA63.7-201ENST00000365579 123 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 MIR548F5-201ENST00000408421 86 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 MIR548F4-201ENST00000408515 105 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC078974.1-201ENST00000411597 223 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 AC069213.2-201ENST00000420238 366 ntBASIC9.28□□□□□ -0.92
TRIM41Q8WV44 PRUNEP1-201ENST00000425846 705 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms